Fraxinus pennsylvanica (fraxinus_pennsylvanica)
Imported from atlas release summary for Fraxinus pennsylvanica.
2074
Candidate Genes
103
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
6
Pathways
Family Distribution
2074
Candidate Genes
BAHD
6.08%
C4H
5.43%
UGT
5.24%
7DLGT
4.81%
C3'H/CYP98A
4.75%
UFGT
4.54%
POD
3.8%
CYP76
3.65%
Other Families
61.7%
More Families (95)
4CL
153
3.23%
F3H
144
3.04%
IFS
135
2.85%
T3O
114
2.41%
CAD
108
2.28%
DWF4/CYP90B1
106
2.24%
F3'H/CYP75B
96
2.03%
NMT
88
1.86%
SMT1/SMT2/SMT3
87
1.84%
CODM/T6ODM
84
1.77%
STR
78
1.65%
H6H
76
1.6%
TPS
75
1.58%
CAS
74
1.56%
GES
69
1.46%
LAC
67
1.41%
TRI/TRII
60
1.27%
BR6OX2/CYP85A2
58
1.22%
SGD
57
1.2%
T16H
56
1.18%
IFR
48
1.01%
GS
47
0.99%
CSE
47
0.99%
PYKS
46
0.97%
HCT
40
0.84%
CYP71
40
0.84%
G8O/G8H
38
0.8%
IO
36
0.76%
PAL
33
0.7%
CPD/CYP90A1
33
0.7%
PMT
32
0.68%
F3'5'H/CYP75A
32
0.68%
COMT
30
0.63%
F5H/CYP84A
30
0.63%
RAS
30
0.63%
CYP90D1
30
0.63%
TAT
29
0.61%
ANR
24
0.51%
FNS
24
0.51%
SLS
23
0.49%
16OMT
22
0.46%
NCS
20
0.42%
LAMT
20
0.42%
7DLH
20
0.42%
8HGO
20
0.42%
CCR
19
0.4%
ANS/LDOX
17
0.36%
CPR
16
0.34%
DFR
13
0.27%
SQE
13
0.27%
SQS/FDFT1
13
0.27%
GGPPS
13
0.27%
MPO
12
0.25%
BR6OX1/CYP85A1
12
0.25%
CYP719
11
0.23%
COR
11
0.23%
CNMT
11
0.23%
FPPS
11
0.23%
CYP80B1
10
0.21%
HPPR
10
0.21%
ISY
9
0.19%
CYP51G1
9
0.19%
AACT
9
0.19%
HMGR
9
0.19%
MVD
9
0.19%
CHS
8
0.17%
CCoAOMT
8
0.17%
SMO1/SMO2
8
0.17%
ADC
6
0.13%
ROT3/CYP90C1
6
0.13%
DXS
6
0.13%
CHI
5
0.11%
HDR/IspH
5
0.11%
HMGS
5
0.11%
TYDC_DDC
4
0.08%
DWF1
4
0.08%
MVK
4
0.08%
DXR
4
0.08%
TDC
3
0.06%
HYD1
3
0.06%
CPI1
3
0.06%
CMK/IspE
3
0.06%
CYP80F1
2
0.04%
XMT_MXMT_DXMT
2
0.04%
6OMT_4OMT_SOMT
2
0.04%
BBE
2
0.04%
DET2
2
0.04%
DWF7
2
0.04%
IDI
2
0.04%
MDS/IspF
2
0.04%
ODC
1
0.02%
FK
1
0.02%
DWF5
1
0.02%
HDS/IspG
1
0.02%
MCT/IspD
1
0.02%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Candidate Genes | Families | Top family | Results |
|---|---|---|---|---|
| Terpenoid pathway | 652 | 18 | BAHD (235) | View species results |
| Alkaloid pathway | 476 | 22 | 7DLGT (97) | View species results |
| Phenylpropanoid pathway | 394 | 11 | POD (155) | View species results |
| Flavonoid pathway | 283 | 12 | UFGT (197) | View species results |
| Steroid pathway | 147 | 10 | SMT1/SMT2/SMT3 (60) | View species results |
| Rosmarinic acid pathway | 122 | 7 | C4H (33) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Families | Candidate genes | Included families |
|---|---|---|---|
| P450/oxygenase | 24 | 1552 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 358 | BAHD, HCT, RAS |
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Terpenoid pathway
| Gene | Pathway | Family | Confidence | Status | Best Target |
|---|---|---|---|---|---|
| fraxinus_pennsylvanica_Fp_g3562 | Terpenoid | BAHD | low | borderline | BAHD__00059__sp_Q8S8S2_LPCT2_ARATH |
| fraxinus_pennsylvanica_Fp_g35667 | Terpenoid | BAHD | medium | pass | BAHD__00023__sp_O22975_LPAAT_ARATH |
| fraxinus_pennsylvanica_Fp_g35668 | Terpenoid | BAHD | low | borderline | BAHD__00023__sp_O22975_LPAAT_ARATH |
| fraxinus_pennsylvanica_Fp_g3623 | Terpenoid | BAHD | medium | pass | BAHD__00026__sp_O64811_SCP9_ARATH |
| fraxinus_pennsylvanica_Fp_g3624 | Terpenoid | BAHD | medium | pass | BAHD__00025__sp_O64810_SCP10_ARATH |
| fraxinus_pennsylvanica_Fp_g36246 | Terpenoid | BAHD | low | borderline | BAHD__00025__sp_O64810_SCP10_ARATH |
| fraxinus_pennsylvanica_Fp_g36300 | Terpenoid | BAHD | low | borderline | BAHD__00077__sp_Q9FNA9_PDAT1_ARATH |
| fraxinus_pennsylvanica_Fp_g36307 | Terpenoid | BAHD | medium | pass | BAHD__00077__sp_Q9FNA9_PDAT1_ARATH |
| fraxinus_pennsylvanica_Fp_g36308 | Terpenoid | BAHD | medium | pass | BAHD__00077__sp_Q9FNA9_PDAT1_ARATH |
| fraxinus_pennsylvanica_Fp_g36345 | Terpenoid | BAHD | medium | pass | BAHD__00077__sp_Q9FNA9_PDAT1_ARATH |
| fraxinus_pennsylvanica_Fp_g36348 | Terpenoid | BAHD | medium | pass | BAHD__00077__sp_Q9FNA9_PDAT1_ARATH |
| fraxinus_pennsylvanica_Fp_g36349 | Terpenoid | BAHD | medium | pass | BAHD__00077__sp_Q9FNA9_PDAT1_ARATH |
| fraxinus_pennsylvanica_Fp_g36361 | Terpenoid | BAHD | low | borderline | BAHD__00077__sp_Q9FNA9_PDAT1_ARATH |
| fraxinus_pennsylvanica_Fp_g36447 | Terpenoid | BAHD | medium | pass | BAHD__00026__sp_O64811_SCP9_ARATH |
| fraxinus_pennsylvanica_Fp_g36448 | Terpenoid | BAHD | medium | pass | BAHD__00026__sp_O64811_SCP9_ARATH |
| fraxinus_pennsylvanica_Fp_g36449 | Terpenoid | BAHD | low | borderline | BAHD__00055__sp_Q8H780_SCP13_ARATH |
| fraxinus_pennsylvanica_Fp_g37504 | Terpenoid | BAHD | medium | pass | BAHD__00055__sp_Q8H780_SCP13_ARATH |
| fraxinus_pennsylvanica_Fp_g37580 | Terpenoid | BAHD | medium | pass | BAHD__00027__sp_O80437_GPAT6_ARATH |
| fraxinus_pennsylvanica_Fp_g37584 | Terpenoid | BAHD | medium | pass | BAHD__00073__sp_Q9FF86_DCR_ARATH |
| fraxinus_pennsylvanica_Fp_g37905 | Terpenoid | BAHD | medium | pass | BAHD__00058__sp_Q8LG50_LPAT2_ARATH |
| fraxinus_pennsylvanica_Fp_g38077 | Terpenoid | BAHD | medium | pass | BAHD__00085__sp_Q9M1K5_ZDH13_ARATH |
| fraxinus_pennsylvanica_Fp_g38237 | Terpenoid | BAHD | low | borderline | BAHD__00025__sp_O64810_SCP10_ARATH |
| fraxinus_pennsylvanica_Fp_g38440 | Terpenoid | BAHD | medium | pass | BAHD__00077__sp_Q9FNA9_PDAT1_ARATH |
| fraxinus_pennsylvanica_Fp_g38443 | Terpenoid | BAHD | medium | pass | BAHD__00014__sp_B9RK42_GPC1_RICCO |
| fraxinus_pennsylvanica_Fp_g385 | Terpenoid | BAHD | low | borderline | BAHD__00016__sp_D4NUX0_HCT1_ACTRA |
| fraxinus_pennsylvanica_Fp_g38597 | Terpenoid | BAHD | low | borderline | BAHD__00088__sp_Q9M7Z1_ODB2_ARATH |
| fraxinus_pennsylvanica_Fp_g38625 | Terpenoid | BAHD | medium | pass | BAHD__00016__sp_D4NUX0_HCT1_ACTRA |
| fraxinus_pennsylvanica_Fp_g38710 | Terpenoid | BAHD | medium | pass | BAHD__00027__sp_O80437_GPAT6_ARATH |
| fraxinus_pennsylvanica_Fp_g39025 | Terpenoid | BAHD | medium | pass | BAHD__00012__sp_A1XWY7_CFAT_PETHY |
| fraxinus_pennsylvanica_Fp_g39043 | Terpenoid | BAHD | medium | pass | BAHD__00014__sp_B9RK42_GPC1_RICCO |
| fraxinus_pennsylvanica_Fp_g39044 | Terpenoid | BAHD | medium | pass | BAHD__00075__sp_Q9FJB4_GPC1_ARATH |
| fraxinus_pennsylvanica_Fp_g39349 | Terpenoid | BAHD | low | borderline | BAHD__00023__sp_O22975_LPAAT_ARATH |
| fraxinus_pennsylvanica_Fp_g39411 | Terpenoid | BAHD | low | borderline | BAHD__00035__sp_Q0WQK2_ZDHC9_ARATH |
| fraxinus_pennsylvanica_Fp_g3951 | Terpenoid | BAHD | medium | pass | BAHD__00017__sp_F4IDU4_MBOA1_ARATH |
| fraxinus_pennsylvanica_Fp_g39578 | Terpenoid | BAHD | low | borderline | BAHD__00055__sp_Q8H780_SCP13_ARATH |
| fraxinus_pennsylvanica_Fp_g40084 | Terpenoid | BAHD | medium | pass | BAHD__00007__sp_A0A2Z5CVK5_AT2_CROXC |
| fraxinus_pennsylvanica_Fp_g40477 | Terpenoid | BAHD | medium | pass | BAHD__00025__sp_O64810_SCP10_ARATH |
| fraxinus_pennsylvanica_Fp_g40640 | Terpenoid | BAHD | medium | pass | BAHD__00077__sp_Q9FNA9_PDAT1_ARATH |
| fraxinus_pennsylvanica_Fp_g40646 | Terpenoid | BAHD | low | borderline | BAHD__00039__sp_Q3ZPN4_ACMAT_VITLA |
| fraxinus_pennsylvanica_Fp_g40653 | Terpenoid | BAHD | low | borderline | BAHD__00026__sp_O64811_SCP9_ARATH |
| fraxinus_pennsylvanica_Fp_g40675 | Terpenoid | BAHD | low | borderline | BAHD__00026__sp_O64811_SCP9_ARATH |
| fraxinus_pennsylvanica_Fp_g4068 | Terpenoid | BAHD | medium | pass | BAHD__00080__sp_Q9LIH7_ZDHC7_ARATH |
| fraxinus_pennsylvanica_Fp_g40750 | Terpenoid | BAHD | medium | pass | BAHD__00083__sp_Q9LMM0_GPAT4_ARATH |
| fraxinus_pennsylvanica_Fp_g40773 | Terpenoid | BAHD | medium | pass | BAHD__00059__sp_Q8S8S2_LPCT2_ARATH |
| fraxinus_pennsylvanica_Fp_g40807 | Terpenoid | BAHD | medium | pass | BAHD__00060__sp_Q8VYP5_ZDH14_ARATH |
| fraxinus_pennsylvanica_Fp_g41127 | Terpenoid | BAHD | medium | pass | BAHD__00038__sp_Q3EC11_ZDHC2_ARATH |
| fraxinus_pennsylvanica_Fp_g41129 | Terpenoid | BAHD | medium | pass | BAHD__00038__sp_Q3EC11_ZDHC2_ARATH |
| fraxinus_pennsylvanica_Fp_g4120 | Terpenoid | BAHD | medium | pass | BAHD__00039__sp_Q3ZPN4_ACMAT_VITLA |
| fraxinus_pennsylvanica_Fp_g4121 | Terpenoid | BAHD | medium | pass | BAHD__00039__sp_Q3ZPN4_ACMAT_VITLA |
| fraxinus_pennsylvanica_Fp_g41218 | Terpenoid | BAHD | medium | pass | BAHD__00025__sp_O64810_SCP10_ARATH |