Gypsophila paniculata (gypsophila_paniculata)
Imported from atlas release summary for Gypsophila paniculata.
1382
Candidate Protein Records
1071
Pathway-Level Records
2702
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
- Download candidate protein FASTA for this species
Pathway Coverage
6
Pathways
Family Distribution
2702
Family-Level Calls
BAHD
6.96%
POD
5.51%
C3'H/CYP98A
5.07%
C4H
5.0%
UGT
4.15%
7DLGT
3.96%
UFGT
3.96%
4CL
3.77%
Other Families
61.62%
More Families (95)
F3H
93
3.44%
CYP76
83
3.07%
IFS
76
2.81%
NMT
72
2.66%
T3O
69
2.55%
CODM/T6ODM
63
2.33%
F3'H/CYP75B
52
1.92%
DWF4/CYP90B1
50
1.85%
STR
49
1.81%
H6H
49
1.81%
BR6OX2/CYP85A2
49
1.81%
RAS
39
1.44%
SMT1/SMT2/SMT3
38
1.41%
TRI/TRII
35
1.3%
HCT
34
1.26%
PYKS
31
1.15%
CAD
30
1.11%
CSE
29
1.07%
CYP71
29
1.07%
IFR
27
1.0%
LAC
27
1.0%
COMT
25
0.93%
PMT
23
0.85%
SGD
22
0.81%
CAS
22
0.81%
BBE
20
0.74%
7DLH
20
0.74%
CYP90D1
20
0.74%
G8O/G8H
19
0.7%
GS
18
0.67%
ANS/LDOX
18
0.67%
T16H
17
0.63%
TPS
17
0.63%
GES
16
0.59%
FNS
16
0.59%
CCR
16
0.59%
TAT
16
0.59%
IO
15
0.56%
ANR
15
0.56%
FPPS
15
0.56%
F5H/CYP84A
14
0.52%
SLS
13
0.48%
16OMT
13
0.48%
F3'5'H/CYP75A
13
0.48%
CYP51G1
13
0.48%
PAL
12
0.44%
NCS
10
0.37%
CHS
10
0.37%
DFR
10
0.37%
CPD/CYP90A1
10
0.37%
BR6OX1/CYP85A1
9
0.33%
COR
8
0.3%
8HGO
8
0.3%
CCoAOMT
8
0.3%
CPR
8
0.3%
ROT3/CYP90C1
8
0.3%
CNMT
7
0.26%
SQS/FDFT1
7
0.26%
AACT
7
0.26%
CYP719
6
0.22%
ISY
6
0.22%
HPPR
6
0.22%
LAMT
5
0.19%
FLS
5
0.19%
CHI
5
0.19%
SMO1/SMO2
5
0.19%
MPO
4
0.15%
DET2
4
0.15%
DWF7
4
0.15%
GGPPS
4
0.15%
DXS
4
0.15%
MVD
4
0.15%
DWF1
3
0.11%
SQE
3
0.11%
HMGS
3
0.11%
GPPS
3
0.11%
HMGR
3
0.11%
CYP80F1
2
0.07%
6OMT_4OMT_SOMT
2
0.07%
CYP80B1
2
0.07%
TDC
2
0.07%
FK
2
0.07%
IDI
2
0.07%
PMK
2
0.07%
CMK/IspE
2
0.07%
ADC
1
0.04%
TYDC_DDC
1
0.04%
CPI1
1
0.04%
DWF5
1
0.04%
MCT/IspD
1
0.04%
MVK
1
0.04%
MDS/IspF
1
0.04%
DXR
1
0.04%
HDS/IspG
1
0.04%
HDR/IspH
1
0.04%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Pathway-Level Records | Detected Families | Top family | Results |
|---|---|---|---|---|
| Terpenoid pathway | 322 | 20 | BAHD (134) | View species results |
| Phenylpropanoid pathway | 245 | 11 | POD (128) | View species results |
| Alkaloid pathway | 207 | 19 | 7DLGT (32) | View species results |
| Flavonoid pathway | 154 | 11 | UFGT (99) | View species results |
| Rosmarinic acid pathway | 91 | 7 | C4H (28) | View species results |
| Steroid pathway | 52 | 10 | SMT1/SMT2/SMT3 (20) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Detected families | Assignment calls | Included families |
|---|---|---|---|
| P450/oxygenase | 24 | 861 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 261 | BAHD, HCT, RAS |
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: NMT
| Protein/Isoform Record | Pathway | Family | Confidence | Status | Best Target |
|---|---|---|---|---|---|
| gypsophila_paniculata_Gpan11g01150.m1 | Alkaloid | NMT | medium | borderline | NMT__00011__sp_A9X7L0_ANMT_RUTGR |
| gypsophila_paniculata_Gpan11g01169.m1 | Alkaloid | NMT | medium | borderline | NMT__00009__sp_A0AA51VIL7_NMT1_LOPWI |
| gypsophila_paniculata_Gpan12g00833.m1 | Alkaloid | NMT | medium | borderline | NMT__00053__sp_Q9C6B9_PEAM3_ARATH |
| gypsophila_paniculata_Gpan13g00827.m1 | Alkaloid | NMT | low | borderline | NMT__00056__sp_Q9FNE9_ATXR6_ARATH |
| gypsophila_paniculata_Gpan13g00898.m1 | Alkaloid | NMT | low | borderline | NMT__00028__sp_Q2LAE1_ASHH2_ARATH |
| gypsophila_paniculata_Gpan13g01210.m1 | Alkaloid | NMT | low | borderline | NMT__00046__sp_Q8VZ17_SUVH6_ARATH |
| gypsophila_paniculata_Gpan14g00033.m1 | Alkaloid | NMT | medium | pass | NMT__00009__sp_A0AA51VIL7_NMT1_LOPWI |
| gypsophila_paniculata_Gpan14g00111.m1 | Alkaloid | NMT | medium | pass | NMT__00009__sp_A0AA51VIL7_NMT1_LOPWI |
| gypsophila_paniculata_Gpan14g00451.m1 | Alkaloid | NMT | low | borderline | NMT__00039__sp_Q84W92_ANM13_ARATH |
| gypsophila_paniculata_Gpan14g00469.m1 | Alkaloid | NMT | medium | pass | NMT__00019__sp_O22781_SUVH2_ARATH |
| gypsophila_paniculata_Gpan14g01099.m1 | Alkaloid | NMT | medium | borderline | NMT__00009__sp_A0AA51VIL7_NMT1_LOPWI |
| gypsophila_paniculata_Gpan15g00847.m1 | Alkaloid | NMT | medium | pass | NMT__00021__sp_O64827_SUVR5_ARATH |
| gypsophila_paniculata_Gpan15g00938.m1 | Alkaloid | NMT | medium | borderline | NMT__00007__sp_A0A6C0WX00_CKTBS_CAMSB |
| gypsophila_paniculata_Gpan15g01116.m1 | Alkaloid | NMT | low | borderline | NMT__00047__sp_Q8VZJ1_ATXR5_ARATH |
| gypsophila_paniculata_Gpan16g00459.m1 | Alkaloid | NMT | medium | pass | NMT__00042__sp_Q8GZB6_SUVH4_ARATH |
| gypsophila_paniculata_Gpan16g00530.m1 | Alkaloid | NMT | medium | pass | NMT__00032__sp_Q5PP37_ATXR2_ARATH |
| gypsophila_paniculata_Gpan16g00791.m1 | Alkaloid | NMT | low | borderline | NMT__00035__sp_Q6K431_TRX1_ORYSJ |
| gypsophila_paniculata_Gpan16g00829.m1 | Alkaloid | NMT | low | borderline | NMT__00068__sp_Q9XI84_RBCMT_ARATH |
| gypsophila_paniculata_Gpan17g00287.m1 | Alkaloid | NMT | medium | pass | NMT__00024__sp_P0CB22_ATX2_ARATH |
| gypsophila_paniculata_Gpan17g00496.m1 | Alkaloid | NMT | medium | pass | NMT__00041__sp_Q8GWT4_ANM15_ARATH |
| gypsophila_paniculata_Gpan17g00863.m1 | Alkaloid | NMT | medium | pass | NMT__00055__sp_Q9FNC7_SUVR2_ARATH |
| gypsophila_paniculata_Gpan17g01085.m1 | Alkaloid | NMT | low | borderline | NMT__00019__sp_O22781_SUVH2_ARATH |