PlantSME Plant secondary metabolism enzyme database

Juglans microcarpa (juglans_microcarpa)

Imported from atlas release summary for Juglans microcarpa.

2647
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 778 19 BAHD (259) View species results
Alkaloid pathway 563 23 GES (102) View species results
Phenylpropanoid pathway 523 11 POD (186) View species results
Flavonoid pathway 316 13 UFGT (179) View species results
Rosmarinic acid pathway 265 7 C4H (130) View species results
Steroid pathway 202 13 CAS (95) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 3019 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 429 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: F3H
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Gene Pathway Family Confidence Status
Jmicscaffold16430118150.1 Flavonoid F3H medium borderline
Jmicscaffold17080120570.1 Flavonoid F3H low borderline
Jmicscaffold17700123220.1 Flavonoid F3H medium borderline
Jmicscaffold18120124100.1 Flavonoid F3H medium borderline
Jmicscaffold18810127170.1 Flavonoid F3H medium borderline
Jmicscaffold18920128140.1 Flavonoid F3H medium borderline
Jmicscaffold19060129100.1 Flavonoid F3H medium borderline
Jmicscaffold19780131960.1 Flavonoid F3H medium borderline
Jmicscaffold20530134550.1 Flavonoid F3H medium pass
Jmicscaffold21710139490.1 Flavonoid F3H medium borderline
Jmicscaffold2240143360.1 Flavonoid F3H medium borderline
Jmicscaffold22520144490.2 Flavonoid F3H low borderline
Jmicscaffold22760145260.2 Flavonoid F3H medium borderline
Jmicscaffold23580148250.1 Flavonoid F3H medium borderline
Jmicscaffold24240151200.1 Flavonoid F3H medium borderline
Jmicscaffold24590153000.1 Flavonoid F3H medium borderline
Jmicscaffold24830154410.1 Flavonoid F3H low borderline
Jmicscaffold25230156610.1 Flavonoid F3H medium borderline
Jmicscaffold25430157190.1 Flavonoid F3H medium borderline
Jmicscaffold25730158420.1 Flavonoid F3H medium borderline
Jmicscaffold26700162230.1 Flavonoid F3H medium borderline
Jmicscaffold27990166780.1 Flavonoid F3H medium borderline
Jmicscaffold29310170600.1 Flavonoid F3H medium pass
Jmicscaffold29330170730.1 Flavonoid F3H medium borderline
Jmicscaffold29470171240.1 Flavonoid F3H medium borderline
Jmicscaffold29790173030.1 Flavonoid F3H low borderline
Jmicscaffold29940173750.1 Flavonoid F3H medium pass
Jmicscaffold31940180810.1 Flavonoid F3H low borderline
Jmicscaffold32460183730.1 Flavonoid F3H medium borderline
Jmicscaffold3290184610.1 Flavonoid F3H medium borderline
Jmicscaffold33250186910.2 Flavonoid F3H medium borderline
Jmicscaffold33330187350.1 Flavonoid F3H low borderline
Jmicscaffold34760191930.1 Flavonoid F3H medium pass
Jmicscaffold34950192890.1 Flavonoid F3H medium borderline
Jmicscaffold35150193780.1 Flavonoid F3H medium borderline
Jmicscaffold35240194190.1 Flavonoid F3H medium borderline
Jmicscaffold35460195310.1 Flavonoid F3H medium borderline
Jmicscaffold35460195430.1 Flavonoid F3H medium borderline
Jmicscaffold35740196990.1 Flavonoid F3H medium borderline
Jmicscaffold35880197480.1 Flavonoid F3H medium borderline
Jmicscaffold37000203160.1 Flavonoid F3H medium borderline
Jmicscaffold37090203520.1 Flavonoid F3H low borderline
Jmicscaffold3740204660.1 Flavonoid F3H medium borderline
Jmicscaffold40410215830.1 Flavonoid F3H medium borderline
Jmicscaffold40510215930.1 Flavonoid F3H low borderline
Jmicscaffold40530216110.1 Flavonoid F3H medium borderline
Jmicscaffold40810217160.1 Flavonoid F3H medium borderline
Jmicscaffold41440219270.1 Flavonoid F3H medium borderline
Jmicscaffold41550219930.1 Flavonoid F3H medium borderline
Jmicscaffold42060221980.1 Flavonoid F3H medium borderline