PlantSME Plant secondary metabolism enzyme database

Juglans microcarpa (juglans_microcarpa)

Imported from atlas release summary for Juglans microcarpa.

2647
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 778 19 BAHD (259) View species results
Alkaloid pathway 563 23 GES (102) View species results
Phenylpropanoid pathway 523 11 POD (186) View species results
Flavonoid pathway 316 13 UFGT (179) View species results
Rosmarinic acid pathway 265 7 C4H (130) View species results
Steroid pathway 202 13 CAS (95) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 3019 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 429 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: PMT
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Gene Pathway Family Confidence Status
JmicC8057530025270.1 Alkaloid PMT low borderline
JmicC8072710029810.1 Alkaloid PMT medium borderline
JmicC8088010034880.1 Alkaloid PMT medium borderline
JmicC8117450045010.1 Alkaloid PMT medium pass
JmicC8122270047670.1 Alkaloid PMT low borderline
Jmicscaffold100780084490.1 Alkaloid PMT medium pass
Jmicscaffold100930085430.1 Alkaloid PMT medium borderline
Jmicscaffold12730103660.2 Alkaloid PMT low borderline
Jmicscaffold18830127300.1 Alkaloid PMT medium pass
Jmicscaffold23020146930.1 Alkaloid PMT medium borderline
Jmicscaffold27760166010.1 Alkaloid PMT medium pass
Jmicscaffold2900169750.1 Alkaloid PMT medium borderline
Jmicscaffold3390188800.1 Alkaloid PMT medium pass
Jmicscaffold3670201710.1 Alkaloid PMT low borderline
Jmicscaffold38700209990.1 Alkaloid PMT low borderline
Jmicscaffold38740210350.1 Alkaloid PMT low borderline
Jmicscaffold38910210930.1 Alkaloid PMT low borderline
Jmicscaffold38910210960.1 Alkaloid PMT low borderline
Jmicscaffold45220233460.1 Alkaloid PMT low borderline
Jmicscaffold46430237770.1 Alkaloid PMT medium borderline
Jmicscaffold48950247910.1 Alkaloid PMT low borderline
Jmicscaffold5000252280.1 Alkaloid PMT medium pass
Jmicscaffold55980274660.1 Alkaloid PMT medium pass
Jmicscaffold59060284110.1 Alkaloid PMT low borderline
Jmicscaffold61720291980.1 Alkaloid PMT medium pass
Jmicscaffold62630295610.1 Alkaloid PMT low borderline
Jmicscaffold65170304230.1 Alkaloid PMT medium pass
Jmicscaffold65820307350.1 Alkaloid PMT low borderline
Jmicscaffold66800311700.1 Alkaloid PMT low borderline
Jmicscaffold69050321520.1 Alkaloid PMT low borderline
Jmicscaffold73040336670.1 Alkaloid PMT low borderline
Jmicscaffold75440343270.1 Alkaloid PMT medium borderline
Jmicscaffold90400384060.1 Alkaloid PMT medium borderline
Jmicscaffold90860385300.1 Alkaloid PMT medium pass
Jmicscaffold9200387840.1 Alkaloid PMT low borderline
Jmicscaffold97350405050.1 Alkaloid PMT medium borderline