PlantSME Plant secondary metabolism enzyme database

Juglans microcarpa (juglans_microcarpa)

Imported from atlas release summary for Juglans microcarpa.

2647
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 778 19 BAHD (259) View species results
Alkaloid pathway 563 23 GES (102) View species results
Phenylpropanoid pathway 523 11 POD (186) View species results
Flavonoid pathway 316 13 UFGT (179) View species results
Rosmarinic acid pathway 265 7 C4H (130) View species results
Steroid pathway 202 13 CAS (95) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 3019 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 429 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: LAMT
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Gene Pathway Family Confidence Status Best Target
JmicC8016510017140.1 Alkaloid LAMT medium borderline LAMT__00001__sp_B2KPR3_LAMT_CATRO
JmicC8062650026740.1 Alkaloid LAMT medium borderline LAMT__00001__sp_B2KPR3_LAMT_CATRO
JmicC8076450031100.1 Alkaloid LAMT medium borderline LAMT__00001__sp_B2KPR3_LAMT_CATRO
Jmicscaffold100490082900.1 Alkaloid LAMT medium borderline LAMT__00001__sp_B2KPR3_LAMT_CATRO
Jmicscaffold13860108460.1 Alkaloid LAMT medium borderline LAMT__00001__sp_B2KPR3_LAMT_CATRO
Jmicscaffold13860108610.1 Alkaloid LAMT medium borderline LAMT__00001__sp_B2KPR3_LAMT_CATRO
Jmicscaffold14780112180.1 Alkaloid LAMT medium borderline LAMT__00001__sp_B2KPR3_LAMT_CATRO
Jmicscaffold1900128800.1 Alkaloid LAMT medium borderline LAMT__00001__sp_B2KPR3_LAMT_CATRO
Jmicscaffold19250130440.1 Alkaloid LAMT medium borderline LAMT__00001__sp_B2KPR3_LAMT_CATRO
Jmicscaffold20710135260.1 Alkaloid LAMT medium borderline LAMT__00001__sp_B2KPR3_LAMT_CATRO
Jmicscaffold2520156290.1 Alkaloid LAMT medium borderline LAMT__00001__sp_B2KPR3_LAMT_CATRO
Jmicscaffold25210156440.1 Alkaloid LAMT medium borderline LAMT__00001__sp_B2KPR3_LAMT_CATRO
Jmicscaffold27820166160.1 Alkaloid LAMT medium borderline LAMT__00001__sp_B2KPR3_LAMT_CATRO
Jmicscaffold35390194920.2 Alkaloid LAMT medium borderline LAMT__00001__sp_B2KPR3_LAMT_CATRO
Jmicscaffold37320204080.1 Alkaloid LAMT medium borderline LAMT__00001__sp_B2KPR3_LAMT_CATRO
Jmicscaffold39180212550.1 Alkaloid LAMT medium borderline LAMT__00001__sp_B2KPR3_LAMT_CATRO
Jmicscaffold41210218650.1 Alkaloid LAMT medium borderline LAMT__00001__sp_B2KPR3_LAMT_CATRO
Jmicscaffold47320241230.1 Alkaloid LAMT medium borderline LAMT__00001__sp_B2KPR3_LAMT_CATRO
Jmicscaffold47860243360.1 Alkaloid LAMT medium borderline LAMT__00001__sp_B2KPR3_LAMT_CATRO
Jmicscaffold51300257750.1 Alkaloid LAMT medium borderline LAMT__00001__sp_B2KPR3_LAMT_CATRO
Jmicscaffold52110261520.1 Alkaloid LAMT medium borderline LAMT__00001__sp_B2KPR3_LAMT_CATRO
Jmicscaffold67060312570.1 Alkaloid LAMT medium pass LAMT__00001__sp_B2KPR3_LAMT_CATRO
Jmicscaffold71060329900.1 Alkaloid LAMT medium borderline LAMT__00001__sp_B2KPR3_LAMT_CATRO
Jmicscaffold71140330040.1 Alkaloid LAMT medium borderline LAMT__00001__sp_B2KPR3_LAMT_CATRO
Jmicscaffold78740353320.1 Alkaloid LAMT medium pass LAMT__00001__sp_B2KPR3_LAMT_CATRO
Jmicscaffold82580364240.1 Alkaloid LAMT medium borderline LAMT__00001__sp_B2KPR3_LAMT_CATRO
Jmicscaffold82750365410.1 Alkaloid LAMT medium borderline LAMT__00001__sp_B2KPR3_LAMT_CATRO
Jmicscaffold85060370920.1 Alkaloid LAMT medium borderline LAMT__00001__sp_B2KPR3_LAMT_CATRO
Jmicscaffold88370378350.1 Alkaloid LAMT medium borderline LAMT__00001__sp_B2KPR3_LAMT_CATRO
Jmicscaffold9400393540.1 Alkaloid LAMT medium borderline LAMT__00001__sp_B2KPR3_LAMT_CATRO