PlantSME Plant secondary metabolism enzyme database

Juglans microcarpa (juglans_microcarpa)

Imported from atlas release summary for Juglans microcarpa.

2647
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 778 19 BAHD (259) View species results
Alkaloid pathway 563 23 GES (102) View species results
Phenylpropanoid pathway 523 11 POD (186) View species results
Flavonoid pathway 316 13 UFGT (179) View species results
Rosmarinic acid pathway 265 7 C4H (130) View species results
Steroid pathway 202 13 CAS (95) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 3019 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 429 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: IO
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Gene Pathway Family Confidence Status
JmicC7835790002220.1 Alkaloid IO medium borderline
JmicC7952950008460.1 Alkaloid IO medium borderline
JmicC7974210010950.1 Alkaloid IO medium borderline
JmicC8016830017180.1 Alkaloid IO medium borderline
JmicC8059350025840.1 Alkaloid IO medium borderline
JmicC8120510046600.1 Alkaloid IO medium borderline
JmicC8138050056510.1 Alkaloid IO medium borderline
Jmicscaffold100840084790.1 Alkaloid IO medium borderline
Jmicscaffold101100086740.1 Alkaloid IO medium borderline
Jmicscaffold10480092980.2 Alkaloid IO medium borderline
Jmicscaffold11260097230.1 Alkaloid IO medium borderline
Jmicscaffold11850100210.1 Alkaloid IO medium borderline
Jmicscaffold15360115430.1 Alkaloid IO medium borderline
Jmicscaffold1570116340.1 Alkaloid IO medium borderline
Jmicscaffold19060129270.1 Alkaloid IO medium borderline
Jmicscaffold19370130720.1 Alkaloid IO medium borderline
Jmicscaffold24920155070.1 Alkaloid IO medium borderline
Jmicscaffold26550161570.1 Alkaloid IO medium borderline
Jmicscaffold31820180020.1 Alkaloid IO medium borderline
Jmicscaffold3310185970.1 Alkaloid IO medium borderline
Jmicscaffold34720191680.1 Alkaloid IO medium borderline
Jmicscaffold34800192350.1 Alkaloid IO medium borderline
Jmicscaffold35380194830.1 Alkaloid IO medium borderline
Jmicscaffold36310199650.1 Alkaloid IO medium pass
Jmicscaffold36800202420.1 Alkaloid IO medium borderline
Jmicscaffold39130212470.1 Alkaloid IO medium borderline
Jmicscaffold40100214920.1 Alkaloid IO medium borderline
Jmicscaffold40350215450.1 Alkaloid IO medium borderline
Jmicscaffold40350215490.1 Alkaloid IO low borderline
Jmicscaffold40880217760.1 Alkaloid IO medium borderline
Jmicscaffold43460228250.1 Alkaloid IO medium borderline
Jmicscaffold44780231780.1 Alkaloid IO medium borderline
Jmicscaffold48500246490.1 Alkaloid IO medium borderline
Jmicscaffold49850251670.1 Alkaloid IO medium borderline
Jmicscaffold51230256870.1 Alkaloid IO high pass
Jmicscaffold51900260340.1 Alkaloid IO medium borderline
Jmicscaffold51950260440.1 Alkaloid IO medium borderline
Jmicscaffold60550288270.1 Alkaloid IO medium borderline
Jmicscaffold62060293730.1 Alkaloid IO medium borderline
Jmicscaffold62900296430.1 Alkaloid IO low borderline
Jmicscaffold66190309000.2 Alkaloid IO medium borderline
Jmicscaffold66280309150.1 Alkaloid IO medium borderline
Jmicscaffold70000325600.1 Alkaloid IO medium borderline
Jmicscaffold71660331660.1 Alkaloid IO medium borderline
Jmicscaffold72230333810.1 Alkaloid IO medium borderline
Jmicscaffold72470334360.1 Alkaloid IO medium borderline
Jmicscaffold79210354980.1 Alkaloid IO medium borderline
Jmicscaffold79650355840.1 Alkaloid IO medium borderline
Jmicscaffold80490358490.1 Alkaloid IO medium pass
Jmicscaffold85350371480.1 Alkaloid IO medium borderline