PlantSME Plant secondary metabolism enzyme database

Juglans microcarpa (juglans_microcarpa)

Imported from atlas release summary for Juglans microcarpa.

2647
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 778 19 BAHD (259) View species results
Alkaloid pathway 563 23 GES (102) View species results
Phenylpropanoid pathway 523 11 POD (186) View species results
Flavonoid pathway 316 13 UFGT (179) View species results
Rosmarinic acid pathway 265 7 C4H (130) View species results
Steroid pathway 202 13 CAS (95) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 3019 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 429 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: F3H
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Gene Pathway Family Confidence Status
Jmicscaffold42480223380.1 Flavonoid F3H medium borderline
Jmicscaffold42990225600.1 Flavonoid F3H low borderline
Jmicscaffold42990225620.1 Flavonoid F3H medium borderline
Jmicscaffold43830229080.1 Flavonoid F3H medium borderline
Jmicscaffold44260230270.1 Flavonoid F3H medium borderline
Jmicscaffold44920232310.1 Flavonoid F3H medium borderline
Jmicscaffold45400234110.1 Flavonoid F3H medium borderline
Jmicscaffold45400234190.1 Flavonoid F3H medium borderline
Jmicscaffold45490234700.1 Flavonoid F3H medium borderline
Jmicscaffold47240240690.1 Flavonoid F3H medium borderline
Jmicscaffold47540241890.1 Flavonoid F3H medium borderline
Jmicscaffold47560242040.1 Flavonoid F3H medium borderline
Jmicscaffold4830245440.1 Flavonoid F3H medium borderline
Jmicscaffold49160248880.1 Flavonoid F3H medium borderline
Jmicscaffold49340249850.1 Flavonoid F3H medium borderline
Jmicscaffold49460250330.1 Flavonoid F3H medium borderline
Jmicscaffold50150253190.1 Flavonoid F3H medium borderline
Jmicscaffold5140258260.1 Flavonoid F3H medium borderline
Jmicscaffold52050260910.1 Flavonoid F3H low borderline
Jmicscaffold52610263000.1 Flavonoid F3H medium pass
Jmicscaffold52710263590.1 Flavonoid F3H medium borderline
Jmicscaffold52850264120.1 Flavonoid F3H medium borderline
Jmicscaffold53200264950.1 Flavonoid F3H medium borderline
Jmicscaffold53750266420.1 Flavonoid F3H medium borderline
Jmicscaffold5410268250.1 Flavonoid F3H medium pass
Jmicscaffold54200268690.1 Flavonoid F3H medium pass
Jmicscaffold54300269210.1 Flavonoid F3H medium borderline
Jmicscaffold54580269940.1 Flavonoid F3H medium borderline
Jmicscaffold55240272200.1 Flavonoid F3H medium borderline
Jmicscaffold55460272870.1 Flavonoid F3H low borderline
Jmicscaffold56760277200.1 Flavonoid F3H medium borderline
Jmicscaffold56860277880.1 Flavonoid F3H medium borderline
Jmicscaffold57470279600.3 Flavonoid F3H medium borderline
Jmicscaffold57880280940.1 Flavonoid F3H medium borderline
Jmicscaffold5830282320.1 Flavonoid F3H medium borderline
Jmicscaffold58960283970.1 Flavonoid F3H low borderline
Jmicscaffold60240287500.1 Flavonoid F3H medium borderline
Jmicscaffold61490291420.1 Flavonoid F3H low borderline
Jmicscaffold61620291790.1 Flavonoid F3H low borderline
Jmicscaffold61800292300.1 Flavonoid F3H low borderline
Jmicscaffold61830292400.1 Flavonoid F3H medium borderline
Jmicscaffold61880292700.1 Flavonoid F3H medium borderline
Jmicscaffold63180297020.1 Flavonoid F3H medium borderline
Jmicscaffold63370297660.1 Flavonoid F3H medium borderline
Jmicscaffold65170304250.1 Flavonoid F3H medium borderline
Jmicscaffold65540305930.1 Flavonoid F3H medium borderline
Jmicscaffold65770307090.1 Flavonoid F3H medium borderline
Jmicscaffold65820307320.1 Flavonoid F3H medium borderline
Jmicscaffold66710311220.1 Flavonoid F3H medium borderline
Jmicscaffold67550315340.1 Flavonoid F3H medium borderline