PlantSME Plant secondary metabolism enzyme database

Juglans microcarpa (juglans_microcarpa)

Imported from atlas release summary for Juglans microcarpa.

2647
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 778 19 BAHD (259) View species results
Alkaloid pathway 563 23 GES (102) View species results
Phenylpropanoid pathway 523 11 POD (186) View species results
Flavonoid pathway 316 13 UFGT (179) View species results
Rosmarinic acid pathway 265 7 C4H (130) View species results
Steroid pathway 202 13 CAS (95) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 3019 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 429 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: H6H
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Gene Pathway Family Confidence Status
Jmicscaffold42460223250.1 Alkaloid H6H low borderline
Jmicscaffold42990225620.1 Alkaloid H6H medium borderline
Jmicscaffold43830229080.1 Alkaloid H6H medium borderline
Jmicscaffold45400234190.1 Alkaloid H6H medium pass
Jmicscaffold47560242040.1 Alkaloid H6H low borderline
Jmicscaffold49160248880.1 Alkaloid H6H medium borderline
Jmicscaffold49340249850.1 Alkaloid H6H medium borderline
Jmicscaffold49850251530.1 Alkaloid H6H low borderline
Jmicscaffold50150253190.1 Alkaloid H6H low borderline
Jmicscaffold51300257700.1 Alkaloid H6H low borderline
Jmicscaffold5140258260.1 Alkaloid H6H medium borderline
Jmicscaffold52050260910.1 Alkaloid H6H low borderline
Jmicscaffold53750266420.1 Alkaloid H6H low borderline
Jmicscaffold55240272200.1 Alkaloid H6H medium borderline
Jmicscaffold55430272830.1 Alkaloid H6H low borderline
Jmicscaffold56130275480.1 Alkaloid H6H low borderline
Jmicscaffold5830282320.1 Alkaloid H6H medium borderline
Jmicscaffold58960283970.1 Alkaloid H6H low borderline
Jmicscaffold61490291420.1 Alkaloid H6H low borderline
Jmicscaffold61790292200.1 Alkaloid H6H low borderline
Jmicscaffold61830292400.1 Alkaloid H6H medium borderline
Jmicscaffold64000300130.1 Alkaloid H6H low borderline
Jmicscaffold64320301410.1 Alkaloid H6H medium borderline
Jmicscaffold65170304250.1 Alkaloid H6H medium borderline
Jmicscaffold65820307320.1 Alkaloid H6H medium borderline
Jmicscaffold68610319630.1 Alkaloid H6H low borderline
Jmicscaffold68900320930.1 Alkaloid H6H low borderline
Jmicscaffold70150326390.1 Alkaloid H6H low borderline
Jmicscaffold70710328590.1 Alkaloid H6H medium borderline
Jmicscaffold71960332730.1 Alkaloid H6H medium borderline
Jmicscaffold79640355700.1 Alkaloid H6H low borderline
Jmicscaffold80550358860.1 Alkaloid H6H low borderline
Jmicscaffold81940362020.1 Alkaloid H6H low borderline
Jmicscaffold84870370490.1 Alkaloid H6H low borderline
Jmicscaffold92580389300.1 Alkaloid H6H low borderline
Jmicscaffold92750389920.1 Alkaloid H6H low borderline
Jmicscaffold93810392920.1 Alkaloid H6H low borderline
Jmicscaffold95380398250.1 Alkaloid H6H low borderline
Jmicscaffold95380398260.1 Alkaloid H6H medium borderline
Jmicscaffold95870399870.1 Alkaloid H6H low borderline
Jmicscaffold96030400370.1 Alkaloid H6H low borderline
Jmicscaffold97260404770.1 Alkaloid H6H medium borderline
Jmicscaffold97260404830.1 Alkaloid H6H medium borderline
Jmicscaffold98980411660.2 Alkaloid H6H medium borderline
Jmicscaffold99200412560.1 Alkaloid H6H low borderline