Juglans microcarpa (juglans_microcarpa)
Imported from atlas release summary for Juglans microcarpa.
2647
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
6
Pathways
Family Distribution
2647
Candidate Genes
C4H
7.12%
C3'H/CYP98A
6.74%
IFS
4.69%
CYP76
4.68%
BAHD
4.62%
T3O
3.99%
UGT
3.54%
4CL
3.21%
Other Families
61.41%
More Families (98)
7DLGT
216
3.08%
POD
208
2.97%
UFGT
200
2.85%
F3H
193
2.75%
BR6OX2/CYP85A2
166
2.37%
DWF4/CYP90B1
163
2.32%
CAD
157
2.24%
F3'H/CYP75B
131
1.87%
CAS
119
1.7%
TPS
119
1.7%
CODM/T6ODM
118
1.68%
GES
111
1.58%
STR
102
1.45%
NMT
102
1.45%
H6H
95
1.35%
SMT1/SMT2/SMT3
93
1.33%
CYP71
92
1.31%
TRI/TRII
84
1.2%
CYP90D1
82
1.17%
LAC
79
1.13%
COMT
72
1.03%
IO
64
0.91%
GS
64
0.91%
BBE
63
0.9%
T16H
61
0.87%
HCT
61
0.87%
G8O/G8H
57
0.81%
PYKS
50
0.71%
FNS
50
0.71%
IFR
50
0.71%
TAT
46
0.66%
RAS
44
0.63%
F3'5'H/CYP75A
42
0.6%
CPD/CYP90A1
42
0.6%
ANR
41
0.58%
PAL
39
0.56%
16OMT
37
0.53%
7DLH
36
0.51%
PMT
36
0.51%
CSE
35
0.5%
BR6OX1/CYP85A1
35
0.5%
SLS
34
0.48%
SGD
34
0.48%
NCS
34
0.48%
F5H/CYP84A
32
0.46%
CCR
32
0.46%
LAMT
30
0.43%
CHS
26
0.37%
8HGO
24
0.34%
COR
21
0.3%
CCoAOMT
21
0.3%
CYP80B1
20
0.29%
ROT3/CYP90C1
20
0.29%
GGPPS
20
0.29%
CYP719
19
0.27%
SQE
19
0.27%
CPR
18
0.26%
ANS/LDOX
17
0.24%
ISY
14
0.2%
DFR
14
0.2%
CNMT
12
0.17%
FPPS
12
0.17%
CYP51G1
11
0.16%
AACT
11
0.16%
TYDC_DDC
10
0.14%
HPPR
10
0.14%
SQS/FDFT1
10
0.14%
MPO
9
0.13%
6OMT_4OMT_SOMT
8
0.11%
MVK
8
0.11%
MVD
8
0.11%
CHI
7
0.1%
SMO1/SMO2
7
0.1%
HMGR
7
0.1%
DET2
6
0.09%
DXS
6
0.09%
DWF7
5
0.07%
CPI1
5
0.07%
DWF5
5
0.07%
HYD1
4
0.06%
CMK/IspE
4
0.06%
MCT/IspD
4
0.06%
TDC
3
0.04%
CYP80F1
3
0.04%
ADC
3
0.04%
XMT_MXMT_DXMT
3
0.04%
DXR
3
0.04%
FLS
2
0.03%
FK
2
0.03%
GPPS
2
0.03%
IDI
2
0.03%
HDR/IspH
2
0.03%
HMGS
2
0.03%
MDS/IspF
2
0.03%
PMK
2
0.03%
ODC
1
0.01%
DWF1
1
0.01%
HDS/IspG
1
0.01%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Candidate Genes | Families | Top family | Results |
|---|---|---|---|---|
| Terpenoid pathway | 778 | 19 | BAHD (259) | View species results |
| Alkaloid pathway | 563 | 23 | GES (102) | View species results |
| Phenylpropanoid pathway | 523 | 11 | POD (186) | View species results |
| Flavonoid pathway | 316 | 13 | UFGT (179) | View species results |
| Rosmarinic acid pathway | 265 | 7 | C4H (130) | View species results |
| Steroid pathway | 202 | 13 | CAS (95) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Families | Candidate genes | Included families |
|---|---|---|---|
| P450/oxygenase | 24 | 3019 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 429 | BAHD, HCT, RAS |
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Terpenoid pathway
| Gene | Pathway | Family | Confidence | Status | Best Target |
|---|---|---|---|---|---|
| JmicC8134830054710.1 | Terpenoid | BAHD | medium | pass | BAHD__00062__sp_Q93V61_LCAT3_ARATH |
| JmicC8144810060670.1 | Terpenoid | BAHD | medium | pass | BAHD__00025__sp_O64810_SCP10_ARATH |
| JmicC8147690062700.1 | Terpenoid | BAHD | medium | pass | BAHD__00033__sp_P0DXG0_AT_STRYX |
| JmicC8152690065690.1 | Terpenoid | BAHD | medium | pass | BAHD__00025__sp_O64810_SCP10_ARATH |
| JmicC8152730065790.1 | Terpenoid | BAHD | medium | pass | BAHD__00039__sp_Q3ZPN4_ACMAT_VITLA |
| JmicC8153270066340.1 | Terpenoid | BAHD | medium | pass | BAHD__00095__sp_Q9SZ58_BRAT1_ARATH |
| JmicC8155830067820.1 | Terpenoid | BAHD | medium | pass | BAHD__00033__sp_P0DXG0_AT_STRYX |
| JmicC8162850071920.2 | Terpenoid | BAHD | medium | pass | BAHD__00087__sp_Q9M3B1_WSD6_ARATH |
| JmicC8163450072180.1 | Terpenoid | BAHD | low | borderline | BAHD__00015__sp_D2Y3X2_PUN1_CAPAN |
| JmicC8164070072320.1 | Terpenoid | BAHD | medium | pass | BAHD__00087__sp_Q9M3B1_WSD6_ARATH |
| JmicC8167470074220.1 | Terpenoid | BAHD | medium | pass | BAHD__00025__sp_O64810_SCP10_ARATH |
| JmicC8167570074270.1 | Terpenoid | BAHD | medium | pass | BAHD__00093__sp_Q9SV07_ASAT1_ARATH |
| JmicC8167570074290.1 | Terpenoid | BAHD | medium | pass | BAHD__00093__sp_Q9SV07_ASAT1_ARATH |
| JmicC8167830074500.1 | Terpenoid | BAHD | medium | pass | BAHD__00015__sp_D2Y3X2_PUN1_CAPAN |
| JmicC8169550075820.1 | Terpenoid | BAHD | medium | pass | BAHD__00012__sp_A1XWY7_CFAT_PETHY |
| JmicC8174730080390.1 | Terpenoid | BAHD | medium | pass | BAHD__00035__sp_Q0WQK2_ZDHC9_ARATH |
| Jmicscaffold100190081380.1 | Terpenoid | BAHD | low | borderline | BAHD__00012__sp_A1XWY7_CFAT_PETHY |
| Jmicscaffold100510082950.1 | Terpenoid | BAHD | medium | pass | BAHD__00047__sp_Q5KS41_WSD11_ARATH |
| Jmicscaffold100780084490.1 | Terpenoid | BAHD | medium | pass | BAHD__00074__sp_Q9FFQ7_FACT_ARATH |
| Jmicscaffold100930085420.1 | Terpenoid | BAHD | medium | pass | BAHD__00055__sp_Q8H780_SCP13_ARATH |
| Jmicscaffold101030086260.1 | Terpenoid | BAHD | low | borderline | BAHD__00016__sp_D4NUX0_HCT1_ACTRA |
| Jmicscaffold101060086430.1 | Terpenoid | BAHD | medium | pass | BAHD__00055__sp_Q8H780_SCP13_ARATH |
| Jmicscaffold101060086440.1 | Terpenoid | BAHD | medium | pass | BAHD__00025__sp_O64810_SCP10_ARATH |
| Jmicscaffold101150087100.1 | Terpenoid | BAHD | low | borderline | BAHD__00088__sp_Q9M7Z1_ODB2_ARATH |
| Jmicscaffold101150087130.1 | Terpenoid | BAHD | low | borderline | BAHD__00006__sp_A0A2R6Q326_AT16_ACTCC |
| Jmicscaffold101240087820.1 | Terpenoid | BAHD | medium | pass | BAHD__00049__sp_Q5PNZ1_ZDH21_ARATH |
| Jmicscaffold101400089190.1 | Terpenoid | BAHD | medium | pass | BAHD__00025__sp_O64810_SCP10_ARATH |
| Jmicscaffold101570090590.1 | Terpenoid | BAHD | medium | pass | BAHD__00059__sp_Q8S8S2_LPCT2_ARATH |
| Jmicscaffold10360092650.1 | Terpenoid | BAHD | medium | pass | BAHD__00026__sp_O64811_SCP9_ARATH |
| Jmicscaffold10700094280.1 | Terpenoid | BAHD | medium | pass | BAHD__00042__sp_Q500Z2_ZDH20_ARATH |
| Jmicscaffold11140095980.1 | Terpenoid | BAHD | medium | pass | BAHD__00032__sp_P0DO84_AT_STRNX |
| Jmicscaffold11410097960.1 | Terpenoid | BAHD | medium | pass | BAHD__00073__sp_Q9FF86_DCR_ARATH |
| Jmicscaffold1150098750.1 | Terpenoid | BAHD | low | borderline | BAHD__00016__sp_D4NUX0_HCT1_ACTRA |
| Jmicscaffold12350102090.1 | Terpenoid | BAHD | medium | pass | BAHD__00025__sp_O64810_SCP10_ARATH |
| Jmicscaffold12350102100.1 | Terpenoid | BAHD | medium | pass | BAHD__00055__sp_Q8H780_SCP13_ARATH |
| Jmicscaffold12630102870.1 | Terpenoid | BAHD | medium | pass | BAHD__00050__sp_Q6DR03_ZDHC3_ARATH |
| Jmicscaffold12630103140.1 | Terpenoid | BAHD | medium | pass | BAHD__00005__sp_A0A161IUT7_DGAT1_CORAE |
| Jmicscaffold12730103660.2 | Terpenoid | BAHD | low | borderline | BAHD__00016__sp_D4NUX0_HCT1_ACTRA |
| Jmicscaffold12770103940.1 | Terpenoid | BAHD | low | borderline | BAHD__00055__sp_Q8H780_SCP13_ARATH |
| Jmicscaffold13240105940.1 | Terpenoid | BAHD | low | borderline | BAHD__00016__sp_D4NUX0_HCT1_ACTRA |
| Jmicscaffold13420106370.1 | Terpenoid | BAHD | medium | pass | BAHD__00047__sp_Q5KS41_WSD11_ARATH |
| Jmicscaffold14810112440.1 | Terpenoid | BAHD | low | borderline | BAHD__00026__sp_O64811_SCP9_ARATH |
| Jmicscaffold16610119240.1 | Terpenoid | BAHD | medium | pass | BAHD__00058__sp_Q8LG50_LPAT2_ARATH |
| Jmicscaffold16730119560.1 | Terpenoid | BAHD | medium | pass | BAHD__00041__sp_Q4VCM1_LCAT2_ARATH |
| Jmicscaffold16730119570.1 | Terpenoid | BAHD | medium | pass | BAHD__00043__sp_Q52T38_ZDH22_ARATH |
| Jmicscaffold16870120270.1 | Terpenoid | BAHD | medium | pass | BAHD__00039__sp_Q3ZPN4_ACMAT_VITLA |
| Jmicscaffold17240121640.1 | Terpenoid | BAHD | medium | pass | BAHD__00056__sp_Q8L5Y5_ZDH17_ARATH |
| Jmicscaffold1820124310.1 | Terpenoid | BAHD | medium | pass | BAHD__00032__sp_P0DO84_AT_STRNX |
| Jmicscaffold18350125090.1 | Terpenoid | BAHD | medium | pass | BAHD__00035__sp_Q0WQK2_ZDHC9_ARATH |
| Jmicscaffold18470125680.2 | Terpenoid | BAHD | medium | pass | BAHD__00055__sp_Q8H780_SCP13_ARATH |