PlantSME Plant secondary metabolism enzyme database

Juglans nigra (juglans_nigra)

Imported from atlas release summary for Juglans nigra.

1793
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 494 19 BAHD (179) View species results
Phenylpropanoid pathway 393 11 POD (147) View species results
Alkaloid pathway 383 23 7DLGT (71) View species results
Flavonoid pathway 245 10 UFGT (152) View species results
Rosmarinic acid pathway 166 7 C4H (68) View species results
Steroid pathway 112 12 CAS (46) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1742 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 315 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: G8O/G8H
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Gene Pathway Family Confidence Status
JnigC5439850013800.1 Alkaloid G8O/G8H medium borderline
Jnigscaffold10520023660.1 Alkaloid G8O/G8H medium borderline
Jnigscaffold10840026120.1 Alkaloid G8O/G8H medium borderline
Jnigscaffold13940038390.1 Alkaloid G8O/G8H medium borderline
Jnigscaffold15820045510.1 Alkaloid G8O/G8H medium borderline
Jnigscaffold16370049110.1 Alkaloid G8O/G8H medium borderline
Jnigscaffold16510049300.1 Alkaloid G8O/G8H medium borderline
Jnigscaffold16580049430.1 Alkaloid G8O/G8H medium borderline
Jnigscaffold18100055500.1 Alkaloid G8O/G8H medium borderline
Jnigscaffold21510067370.1 Alkaloid G8O/G8H medium borderline
Jnigscaffold28260105130.1 Alkaloid G8O/G8H medium pass
Jnigscaffold29470109460.1 Alkaloid G8O/G8H medium borderline
Jnigscaffold2990112180.1 Alkaloid G8O/G8H medium borderline
Jnigscaffold31380119970.1 Alkaloid G8O/G8H medium borderline
Jnigscaffold32930125770.1 Alkaloid G8O/G8H medium borderline
Jnigscaffold33710128800.1 Alkaloid G8O/G8H medium borderline
Jnigscaffold34760132280.1 Alkaloid G8O/G8H medium borderline
Jnigscaffold36870140080.1 Alkaloid G8O/G8H low borderline
Jnigscaffold41050152660.1 Alkaloid G8O/G8H medium borderline
Jnigscaffold42970160090.1 Alkaloid G8O/G8H medium borderline
Jnigscaffold44520164400.1 Alkaloid G8O/G8H medium borderline
Jnigscaffold44940165090.1 Alkaloid G8O/G8H medium pass
Jnigscaffold52150185740.1 Alkaloid G8O/G8H low borderline
Jnigscaffold5400192350.1 Alkaloid G8O/G8H low borderline
Jnigscaffold5400192360.1 Alkaloid G8O/G8H medium borderline
Jnigscaffold5400192400.1 Alkaloid G8O/G8H medium borderline
Jnigscaffold60680208760.1 Alkaloid G8O/G8H medium borderline
Jnigscaffold62530213030.1 Alkaloid G8O/G8H medium borderline
Jnigscaffold64310217250.1 Alkaloid G8O/G8H low borderline
Jnigscaffold66480222950.1 Alkaloid G8O/G8H low borderline
Jnigscaffold66740223470.1 Alkaloid G8O/G8H medium borderline
Jnigscaffold72640238750.1 Alkaloid G8O/G8H medium pass
Jnigscaffold74970244300.1 Alkaloid G8O/G8H medium borderline
Jnigscaffold7750250480.1 Alkaloid G8O/G8H low borderline
Jnigscaffold77840251140.1 Alkaloid G8O/G8H medium borderline
Jnigscaffold91420277910.1 Alkaloid G8O/G8H medium borderline