PlantSME Plant secondary metabolism enzyme database

Juglans nigra (juglans_nigra)

Imported from atlas release summary for Juglans nigra.

2125
Candidate Protein Records
1793
Pathway-Level Records
4519
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 494 19 BAHD (179) View species results
Phenylpropanoid pathway 393 11 POD (147) View species results
Alkaloid pathway 383 23 7DLGT (71) View species results
Flavonoid pathway 245 10 UFGT (152) View species results
Rosmarinic acid pathway 166 7 C4H (68) View species results
Steroid pathway 112 12 CAS (46) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 1742 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 315 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Terpenoid pathway
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Protein/Isoform Record Pathway Family Confidence Status
Jnigscaffold6730224400.1 Terpenoid CYP76 low borderline
Jnigscaffold68590226540.1 Terpenoid CYP76 medium borderline
Jnigscaffold69110228230.1 Terpenoid CYP76 low borderline
Jnigscaffold70800233450.2 Terpenoid CYP76 low borderline
Jnigscaffold71170234360.1 Terpenoid CYP76 medium borderline
Jnigscaffold72160236880.1 Terpenoid CYP76 medium borderline
Jnigscaffold72640238750.1 Terpenoid CYP76 medium pass
Jnigscaffold72640238770.1 Terpenoid CYP76 medium pass
Jnigscaffold73420240400.1 Terpenoid CYP76 medium borderline
Jnigscaffold74970244300.1 Terpenoid CYP76 medium pass
Jnigscaffold7550245720.1 Terpenoid CYP76 medium borderline
Jnigscaffold75830246690.1 Terpenoid CYP76 medium borderline
Jnigscaffold76200247960.1 Terpenoid CYP76 low borderline
Jnigscaffold76200248120.2 Terpenoid CYP76 low borderline
Jnigscaffold7750250480.1 Terpenoid CYP76 low borderline
Jnigscaffold77840251140.1 Terpenoid CYP76 medium pass
Jnigscaffold78550252460.1 Terpenoid CYP76 medium borderline
Jnigscaffold7930253390.1 Terpenoid CYP76 low borderline
Jnigscaffold81110257730.1 Terpenoid CYP76 medium pass
Jnigscaffold83320261290.1 Terpenoid CYP76 medium borderline
Jnigscaffold83320261370.1 Terpenoid CYP76 medium pass
Jnigscaffold83900262590.1 Terpenoid CYP76 medium borderline
Jnigscaffold84000262730.1 Terpenoid CYP76 medium pass
Jnigscaffold84000262760.1 Terpenoid CYP76 low borderline
Jnigscaffold84170262940.1 Terpenoid CYP76 low borderline
Jnigscaffold86870267490.1 Terpenoid CYP76 medium pass
Jnigscaffold87070268380.1 Terpenoid CYP76 medium borderline
Jnigscaffold8980274310.1 Terpenoid CYP76 medium borderline
Jnigscaffold90390275340.2 Terpenoid CYP76 medium borderline
Jnigscaffold91100276910.1 Terpenoid CYP76 medium borderline
Jnigscaffold91380277670.2 Terpenoid CYP76 medium borderline
Jnigscaffold91420277910.1 Terpenoid CYP76 medium pass
Jnigscaffold91670279020.1 Terpenoid CYP76 medium pass
Jnigscaffold91730279650.1 Terpenoid CYP76 medium pass
Jnigscaffold9210280490.1 Terpenoid CYP76 low borderline
Jnigscaffold17270051990.1 Terpenoid DXR high pass
Jnigscaffold55470196390.1 Terpenoid DXR low borderline
Jnigscaffold21730068840.1 Terpenoid DXS low borderline
Jnigscaffold23610077330.1 Terpenoid DXS medium pass
Jnigscaffold26240091070.1 Terpenoid DXS medium pass
Jnigscaffold53300189180.1 Terpenoid DXS medium pass
Jnigscaffold5870205380.1 Terpenoid DXS medium pass
Jnigscaffold8820270220.1 Terpenoid DXS medium pass
JnigC5424910009960.1 Terpenoid FPPS medium pass
Jnigscaffold25980089900.1 Terpenoid FPPS medium pass
Jnigscaffold36400137580.1 Terpenoid FPPS medium pass
Jnigscaffold4130153870.1 Terpenoid FPPS low borderline
Jnigscaffold45880168340.1 Terpenoid FPPS medium pass
Jnigscaffold53140188930.1 Terpenoid FPPS low borderline
Jnigscaffold58140203310.1 Terpenoid FPPS medium pass