PlantSME Plant secondary metabolism enzyme database

Juglans nigra (juglans_nigra)

Imported from atlas release summary for Juglans nigra.

2125
Candidate Protein Records
1793
Pathway-Level Records
4519
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 494 19 BAHD (179) View species results
Phenylpropanoid pathway 393 11 POD (147) View species results
Alkaloid pathway 383 23 7DLGT (71) View species results
Flavonoid pathway 245 10 UFGT (152) View species results
Rosmarinic acid pathway 166 7 C4H (68) View species results
Steroid pathway 112 12 CAS (46) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 1742 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 315 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Phenylpropanoid pathway
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Protein/Isoform Record Pathway Family Confidence Status
Jnigscaffold8130257970.1 Phenylpropanoid COMT medium pass
Jnigscaffold84210263500.1 Phenylpropanoid COMT medium pass
Jnigscaffold85000264360.1 Phenylpropanoid COMT low borderline
Jnigscaffold88370270380.1 Phenylpropanoid COMT medium pass
Jnigscaffold89470273410.1 Phenylpropanoid COMT low borderline
Jnigscaffold8980274280.1 Phenylpropanoid COMT low borderline
Jnigscaffold90070275070.1 Phenylpropanoid COMT low borderline
Jnigscaffold91510278300.1 Phenylpropanoid COMT medium pass
Jnigscaffold91530278330.1 Phenylpropanoid COMT low borderline
JnigC5428290010530.1 Phenylpropanoid CSE medium pass
JnigC5441150014280.1 Phenylpropanoid CSE medium pass
Jnigscaffold13940038130.1 Phenylpropanoid CSE medium pass
Jnigscaffold1540043530.1 Phenylpropanoid CSE medium pass
Jnigscaffold15470043940.1 Phenylpropanoid CSE medium pass
Jnigscaffold16090047630.1 Phenylpropanoid CSE medium pass
Jnigscaffold19150058150.1 Phenylpropanoid CSE medium pass
Jnigscaffold21510067100.1 Phenylpropanoid CSE medium pass
Jnigscaffold2170068260.1 Phenylpropanoid CSE medium pass
Jnigscaffold24580082090.1 Phenylpropanoid CSE medium pass
Jnigscaffold27080095200.1 Phenylpropanoid CSE medium pass
Jnigscaffold27270097670.1 Phenylpropanoid CSE medium pass
Jnigscaffold27500099420.1 Phenylpropanoid CSE medium pass
Jnigscaffold27890102850.1 Phenylpropanoid CSE medium pass
Jnigscaffold2920107540.1 Phenylpropanoid CSE medium pass
Jnigscaffold32230122880.1 Phenylpropanoid CSE medium pass
Jnigscaffold36580138390.1 Phenylpropanoid CSE medium pass
Jnigscaffold40460150840.1 Phenylpropanoid CSE medium pass
Jnigscaffold42320158490.1 Phenylpropanoid CSE medium pass
Jnigscaffold44480163840.1 Phenylpropanoid CSE medium pass
Jnigscaffold45570167220.1 Phenylpropanoid CSE medium pass
Jnigscaffold45730167810.1 Phenylpropanoid CSE medium pass
Jnigscaffold47210172420.1 Phenylpropanoid CSE medium pass
Jnigscaffold47870175320.1 Phenylpropanoid CSE medium pass
Jnigscaffold48530177670.1 Phenylpropanoid CSE medium pass
Jnigscaffold51460183930.1 Phenylpropanoid CSE medium pass
Jnigscaffold55720197250.1 Phenylpropanoid CSE medium pass
Jnigscaffold5680200250.1 Phenylpropanoid CSE medium pass
Jnigscaffold59390207140.1 Phenylpropanoid CSE medium pass
Jnigscaffold60960209620.1 Phenylpropanoid CSE medium pass
Jnigscaffold6930229910.1 Phenylpropanoid CSE medium pass
Jnigscaffold69740230560.1 Phenylpropanoid CSE medium pass
Jnigscaffold74290243250.1 Phenylpropanoid CSE medium pass
Jnigscaffold77830251010.1 Phenylpropanoid CSE low borderline
Jnigscaffold84210263470.1 Phenylpropanoid CSE medium pass
Jnigscaffold86630267140.1 Phenylpropanoid CSE medium pass
Jnigscaffold8980274250.1 Phenylpropanoid CSE medium pass
JnigC5406770006930.1 Phenylpropanoid F5H/CYP84A medium borderline
Jnigscaffold12600033490.1 Phenylpropanoid F5H/CYP84A medium borderline
Jnigscaffold12810033740.1 Phenylpropanoid F5H/CYP84A medium borderline
Jnigscaffold16370049110.1 Phenylpropanoid F5H/CYP84A medium borderline