PlantSME Plant secondary metabolism enzyme database

Juglans nigra (juglans_nigra)

Imported from atlas release summary for Juglans nigra.

2125
Candidate Protein Records
1793
Pathway-Level Records
4519
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 494 19 BAHD (179) View species results
Phenylpropanoid pathway 393 11 POD (147) View species results
Alkaloid pathway 383 23 7DLGT (71) View species results
Flavonoid pathway 245 10 UFGT (152) View species results
Rosmarinic acid pathway 166 7 C4H (68) View species results
Steroid pathway 112 12 CAS (46) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 1742 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 315 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
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Protein/Isoform Record Pathway Family Confidence Status
JnigC5444590017490.1 Alkaloid LAMT medium borderline
Jnigscaffold11940029860.1 Alkaloid LAMT medium borderline
Jnigscaffold11980029910.1 Alkaloid LAMT medium borderline
Jnigscaffold17410052640.1 Alkaloid LAMT medium borderline
Jnigscaffold25350085850.1 Alkaloid LAMT medium borderline
Jnigscaffold27220096250.1 Alkaloid LAMT medium borderline
Jnigscaffold27270097420.1 Alkaloid LAMT medium borderline
Jnigscaffold27890102700.1 Alkaloid LAMT medium borderline
Jnigscaffold29570110160.1 Alkaloid LAMT medium pass
Jnigscaffold30430114250.1 Alkaloid LAMT medium borderline
Jnigscaffold33670128750.1 Alkaloid LAMT medium borderline
Jnigscaffold34340130640.1 Alkaloid LAMT medium pass
Jnigscaffold35410134310.1 Alkaloid LAMT medium borderline
Jnigscaffold45400166570.1 Alkaloid LAMT medium borderline
Jnigscaffold46870171710.1 Alkaloid LAMT medium borderline
Jnigscaffold54530193820.4 Alkaloid LAMT medium borderline
Jnigscaffold66480223030.1 Alkaloid LAMT medium borderline
Jnigscaffold68390225870.1 Alkaloid LAMT medium borderline
Jnigscaffold69110228240.1 Alkaloid LAMT medium borderline
Jnigscaffold75170244940.1 Alkaloid LAMT medium borderline
Jnigscaffold75170244990.1 Alkaloid LAMT medium borderline
Jnigscaffold76180247810.1 Alkaloid LAMT medium borderline
Jnigscaffold78580252520.1 Alkaloid LAMT medium borderline
Jnigscaffold83320261660.1 Alkaloid LAMT medium borderline
Jnigscaffold83430262090.1 Alkaloid LAMT medium borderline
Jnigscaffold89080271660.1 Alkaloid LAMT medium borderline
Jnigscaffold89090271690.1 Alkaloid LAMT medium borderline
JnigC5425110010010.1 Alkaloid MPO medium pass
Jnigscaffold13030034660.1 Alkaloid MPO high pass
Jnigscaffold15230043190.2 Alkaloid MPO medium pass
Jnigscaffold20820065160.1 Alkaloid MPO medium pass
Jnigscaffold2730097770.1 Alkaloid MPO medium pass
Jnigscaffold2750099200.1 Alkaloid MPO medium pass
Jnigscaffold36580138630.1 Alkaloid MPO high pass
Jnigscaffold47600174090.1 Alkaloid MPO medium pass
JnigC5428370010610.1 Alkaloid NCS low borderline
Jnigscaffold10070021590.1 Alkaloid NCS medium borderline
Jnigscaffold12190030890.1 Alkaloid NCS low borderline
Jnigscaffold12820033960.1 Alkaloid NCS low borderline
Jnigscaffold12930034270.1 Alkaloid NCS low borderline
Jnigscaffold16240048260.1 Alkaloid NCS medium borderline
Jnigscaffold20880065500.1 Alkaloid NCS medium borderline
Jnigscaffold20930065600.1 Alkaloid NCS medium borderline
Jnigscaffold23110073610.1 Alkaloid NCS medium borderline
Jnigscaffold25390086300.1 Alkaloid NCS medium borderline
Jnigscaffold30560115350.1 Alkaloid NCS low borderline
Jnigscaffold30700115630.1 Alkaloid NCS low borderline
Jnigscaffold30730115850.1 Alkaloid NCS low borderline
Jnigscaffold31520120550.1 Alkaloid NCS low borderline
Jnigscaffold34530131430.1 Alkaloid NCS low borderline