PlantSME Plant secondary metabolism enzyme database

Juglans nigra (juglans_nigra)

Imported from atlas release summary for Juglans nigra.

2125
Candidate Protein Records
1793
Pathway-Level Records
4519
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 494 19 BAHD (179) View species results
Phenylpropanoid pathway 393 11 POD (147) View species results
Alkaloid pathway 383 23 7DLGT (71) View species results
Flavonoid pathway 245 10 UFGT (152) View species results
Rosmarinic acid pathway 166 7 C4H (68) View species results
Steroid pathway 112 12 CAS (46) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 1742 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 315 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
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Protein/Isoform Record Pathway Family Confidence Status
Jnigscaffold48320177400.1 Alkaloid NMT low borderline
Jnigscaffold48320177420.1 Alkaloid NMT medium borderline
Jnigscaffold50560182430.1 Alkaloid NMT medium pass
Jnigscaffold53080188580.1 Alkaloid NMT medium pass
Jnigscaffold53130188820.1 Alkaloid NMT medium pass
Jnigscaffold53600191070.1 Alkaloid NMT medium borderline
Jnigscaffold53940192020.1 Alkaloid NMT medium borderline
Jnigscaffold61890211540.1 Alkaloid NMT low borderline
Jnigscaffold63860215530.1 Alkaloid NMT low borderline
Jnigscaffold65970221950.1 Alkaloid NMT medium pass
Jnigscaffold68920227750.1 Alkaloid NMT low borderline
Jnigscaffold69110228410.1 Alkaloid NMT medium pass
Jnigscaffold71280234460.1 Alkaloid NMT low borderline
Jnigscaffold74040242520.1 Alkaloid NMT medium borderline
Jnigscaffold7930253180.1 Alkaloid NMT medium pass
Jnigscaffold79500254140.1 Alkaloid NMT medium pass
Jnigscaffold81110257680.1 Alkaloid NMT low borderline
Jnigscaffold82820260500.1 Alkaloid NMT low borderline
Jnigscaffold83580262150.1 Alkaloid NMT medium pass
Jnigscaffold84050262850.1 Alkaloid NMT medium borderline
Jnigscaffold85000264360.1 Alkaloid NMT low borderline
Jnigscaffold86090266310.1 Alkaloid NMT medium pass
Jnigscaffold87030267910.1 Alkaloid NMT medium borderline
Jnigscaffold89780274190.1 Alkaloid NMT medium pass
Jnigscaffold8980274280.1 Alkaloid NMT low borderline
Jnigscaffold90710275950.1 Alkaloid NMT low borderline
Jnigscaffold91510278300.1 Alkaloid NMT medium borderline
Jnigscaffold91530278330.1 Alkaloid NMT medium borderline
Jnigscaffold20550063950.1 Alkaloid ODC medium pass
Jnigscaffold74690243700.1 Alkaloid ODC medium pass
Jnigscaffold89470273540.1 Alkaloid ODC low borderline
JnigC5325270001990.1 Alkaloid PMT medium borderline
Jnigscaffold10600024420.1 Alkaloid PMT medium pass
Jnigscaffold13760037300.1 Alkaloid PMT low borderline
Jnigscaffold13940038500.1 Alkaloid PMT low borderline
Jnigscaffold18560056630.1 Alkaloid PMT medium borderline
Jnigscaffold2660092400.1 Alkaloid PMT low borderline
Jnigscaffold27600100120.1 Alkaloid PMT low borderline
Jnigscaffold27960103200.1 Alkaloid PMT low borderline
Jnigscaffold30520115140.1 Alkaloid PMT medium pass
Jnigscaffold30970117100.1 Alkaloid PMT low borderline
Jnigscaffold38570145680.1 Alkaloid PMT low borderline
Jnigscaffold39260146820.1 Alkaloid PMT medium borderline
Jnigscaffold42630159550.1 Alkaloid PMT medium pass
Jnigscaffold48150175940.1 Alkaloid PMT medium borderline
Jnigscaffold48190176060.1 Alkaloid PMT low borderline
Jnigscaffold4970180460.1 Alkaloid PMT low borderline
Jnigscaffold53500190650.1 Alkaloid PMT low borderline
Jnigscaffold5680200340.1 Alkaloid PMT low borderline
Jnigscaffold63860215430.1 Alkaloid PMT low borderline