PlantSME Plant secondary metabolism enzyme database

Juglans nigra (juglans_nigra)

Imported from atlas release summary for Juglans nigra.

2125
Candidate Protein Records
1793
Pathway-Level Records
4519
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 494 19 BAHD (179) View species results
Phenylpropanoid pathway 393 11 POD (147) View species results
Alkaloid pathway 383 23 7DLGT (71) View species results
Flavonoid pathway 245 10 UFGT (152) View species results
Rosmarinic acid pathway 166 7 C4H (68) View species results
Steroid pathway 112 12 CAS (46) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 1742 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 315 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
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Protein/Isoform Record Pathway Family Confidence Status
Jnigscaffold3210122570.1 Alkaloid T3O medium borderline
Jnigscaffold32660124610.1 Alkaloid T3O medium pass
Jnigscaffold330125880.1 Alkaloid T3O medium borderline
Jnigscaffold33620127410.1 Alkaloid T3O medium pass
Jnigscaffold33710128840.1 Alkaloid T3O medium borderline
Jnigscaffold33710128850.1 Alkaloid T3O medium borderline
Jnigscaffold33930129410.1 Alkaloid T3O low borderline
Jnigscaffold340129970.1 Alkaloid T3O medium pass
Jnigscaffold34760132380.1 Alkaloid T3O medium borderline
Jnigscaffold34760132770.1 Alkaloid T3O medium borderline
Jnigscaffold34950133300.1 Alkaloid T3O medium borderline
Jnigscaffold3880146240.1 Alkaloid T3O medium pass
Jnigscaffold3940147570.1 Alkaloid T3O medium borderline
Jnigscaffold41050152440.1 Alkaloid T3O low borderline
Jnigscaffold4130153740.1 Alkaloid T3O medium borderline
Jnigscaffold41340154440.1 Alkaloid T3O medium pass
Jnigscaffold41480154840.1 Alkaloid T3O medium borderline
Jnigscaffold41870156090.1 Alkaloid T3O medium borderline
Jnigscaffold44480163940.1 Alkaloid T3O medium borderline
Jnigscaffold44940165130.1 Alkaloid T3O medium borderline
Jnigscaffold45580167340.1 Alkaloid T3O medium pass
Jnigscaffold46690170700.1 Alkaloid T3O medium pass
Jnigscaffold47040172210.1 Alkaloid T3O medium borderline
Jnigscaffold4720172320.1 Alkaloid T3O medium borderline
Jnigscaffold47420173200.1 Alkaloid T3O medium borderline
Jnigscaffold47420173240.1 Alkaloid T3O medium borderline
Jnigscaffold4750173690.1 Alkaloid T3O medium pass
Jnigscaffold47950175450.1 Alkaloid T3O medium pass
Jnigscaffold48320177140.1 Alkaloid T3O medium borderline
Jnigscaffold48980179070.1 Alkaloid T3O medium borderline
Jnigscaffold49220179380.1 Alkaloid T3O medium borderline
Jnigscaffold50770182920.1 Alkaloid T3O medium borderline
Jnigscaffold52590187130.1 Alkaloid T3O medium borderline
Jnigscaffold53860191500.2 Alkaloid T3O low borderline
Jnigscaffold55120195240.1 Alkaloid T3O medium borderline
Jnigscaffold55160195430.1 Alkaloid T3O medium borderline
Jnigscaffold56070198060.1 Alkaloid T3O medium borderline
Jnigscaffold56590199450.1 Alkaloid T3O medium pass
Jnigscaffold56600199590.1 Alkaloid T3O medium pass
Jnigscaffold5680200160.1 Alkaloid T3O medium borderline
Jnigscaffold59050206420.1 Alkaloid T3O medium pass
Jnigscaffold5950207310.1 Alkaloid T3O medium pass
Jnigscaffold61550210730.1 Alkaloid T3O medium borderline
Jnigscaffold61920211830.1 Alkaloid T3O low borderline
Jnigscaffold63000213740.1 Alkaloid T3O medium pass
Jnigscaffold64460217460.1 Alkaloid T3O medium borderline
Jnigscaffold65080219080.1 Alkaloid T3O medium borderline
Jnigscaffold65210219700.1 Alkaloid T3O medium borderline
Jnigscaffold65380220130.1 Alkaloid T3O low borderline
Jnigscaffold6580220930.1 Alkaloid T3O medium borderline