PlantSME Plant secondary metabolism enzyme database

Juglans nigra (juglans_nigra)

Imported from atlas release summary for Juglans nigra.

2125
Candidate Protein Records
1793
Pathway-Level Records
4519
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 494 19 BAHD (179) View species results
Phenylpropanoid pathway 393 11 POD (147) View species results
Alkaloid pathway 383 23 7DLGT (71) View species results
Flavonoid pathway 245 10 UFGT (152) View species results
Rosmarinic acid pathway 166 7 C4H (68) View species results
Steroid pathway 112 12 CAS (46) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 1742 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 315 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status
Jnigscaffold24920083700.1 Rosmarinic Acid 4CL medium pass
Jnigscaffold2720095800.1 Rosmarinic Acid 4CL medium pass
Jnigscaffold27750101170.1 Rosmarinic Acid 4CL low borderline
Jnigscaffold27820101790.1 Rosmarinic Acid 4CL medium pass
Jnigscaffold27880102060.1 Rosmarinic Acid 4CL medium pass
Jnigscaffold28150104100.1 Rosmarinic Acid 4CL medium pass
Jnigscaffold30800116010.1 Rosmarinic Acid 4CL medium pass
Jnigscaffold30930117030.1 Rosmarinic Acid 4CL medium pass
Jnigscaffold30990117140.1 Rosmarinic Acid 4CL medium pass
Jnigscaffold36330137070.1 Rosmarinic Acid 4CL medium pass
Jnigscaffold41200153210.1 Rosmarinic Acid 4CL low borderline
Jnigscaffold41310154100.1 Rosmarinic Acid 4CL medium pass
Jnigscaffold4300160210.1 Rosmarinic Acid 4CL medium pass
Jnigscaffold43340161550.1 Rosmarinic Acid 4CL medium pass
Jnigscaffold43970162530.1 Rosmarinic Acid 4CL medium pass
Jnigscaffold45400166680.1 Rosmarinic Acid 4CL medium pass
Jnigscaffold46300169880.1 Rosmarinic Acid 4CL medium pass
Jnigscaffold48290176580.1 Rosmarinic Acid 4CL low borderline
Jnigscaffold49660180430.1 Rosmarinic Acid 4CL low borderline
Jnigscaffold5720200950.1 Rosmarinic Acid 4CL medium pass
Jnigscaffold57570202050.1 Rosmarinic Acid 4CL medium pass
Jnigscaffold57610202300.1 Rosmarinic Acid 4CL medium pass
Jnigscaffold58700205650.1 Rosmarinic Acid 4CL low borderline
Jnigscaffold58890205880.1 Rosmarinic Acid 4CL low borderline
Jnigscaffold60700208900.1 Rosmarinic Acid 4CL medium pass
Jnigscaffold64020216270.1 Rosmarinic Acid 4CL medium pass
Jnigscaffold64280216890.1 Rosmarinic Acid 4CL medium pass
Jnigscaffold69130228510.1 Rosmarinic Acid 4CL medium pass
Jnigscaffold70800233530.1 Rosmarinic Acid 4CL medium pass
Jnigscaffold72180237040.1 Rosmarinic Acid 4CL medium pass
Jnigscaffold72180237080.1 Rosmarinic Acid 4CL low borderline
Jnigscaffold7220237660.1 Rosmarinic Acid 4CL low borderline
Jnigscaffold74040242640.1 Rosmarinic Acid 4CL medium pass
Jnigscaffold76530249110.1 Rosmarinic Acid 4CL medium pass
Jnigscaffold80030255400.1 Rosmarinic Acid 4CL low borderline
Jnigscaffold84650264080.1 Rosmarinic Acid 4CL medium pass
Jnigscaffold84740264120.1 Rosmarinic Acid 4CL low borderline
Jnigscaffold85190264800.1 Rosmarinic Acid 4CL medium pass
Jnigscaffold91370277470.1 Rosmarinic Acid 4CL low borderline
Jnigscaffold91640278890.1 Rosmarinic Acid 4CL medium pass
Jnigscaffold91750279920.1 Rosmarinic Acid 4CL medium pass
Jnigscaffold9480280850.1 Rosmarinic Acid 4CL low borderline
Jnigscaffold990282860.1 Rosmarinic Acid 4CL medium pass
JnigC5279590000930.1 Rosmarinic Acid C4H low borderline
JnigC5334250002280.1 Rosmarinic Acid C4H medium pass
JnigC5335730002340.1 Rosmarinic Acid C4H low borderline
JnigC5389550004970.1 Rosmarinic Acid C4H low borderline
JnigC5400630005980.1 Rosmarinic Acid C4H low borderline
JnigC5406770006930.1 Rosmarinic Acid C4H low borderline
JnigC5407130007160.1 Rosmarinic Acid C4H low borderline