PlantSME Plant secondary metabolism enzyme database

Juglans nigra (juglans_nigra)

Imported from atlas release summary for Juglans nigra.

1793
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 494 19 BAHD (179) View species results
Phenylpropanoid pathway 393 11 POD (147) View species results
Alkaloid pathway 383 23 7DLGT (71) View species results
Flavonoid pathway 245 10 UFGT (152) View species results
Rosmarinic acid pathway 166 7 C4H (68) View species results
Steroid pathway 112 12 CAS (46) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1742 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 315 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Gene Pathway Family Confidence Status
JnigC5441690014810.1 Alkaloid CODM/T6ODM low borderline
Jnigscaffold10920026470.1 Alkaloid CODM/T6ODM medium borderline
Jnigscaffold11270028040.1 Alkaloid CODM/T6ODM medium borderline
Jnigscaffold12260031110.1 Alkaloid CODM/T6ODM medium borderline
Jnigscaffold12330032400.2 Alkaloid CODM/T6ODM medium borderline
Jnigscaffold13940038490.1 Alkaloid CODM/T6ODM medium borderline
Jnigscaffold160046140.1 Alkaloid CODM/T6ODM medium borderline
Jnigscaffold18790057010.1 Alkaloid CODM/T6ODM medium borderline
Jnigscaffold18810057130.1 Alkaloid CODM/T6ODM medium pass
Jnigscaffold19750060790.1 Alkaloid CODM/T6ODM medium borderline
Jnigscaffold21510067260.1 Alkaloid CODM/T6ODM medium borderline
Jnigscaffold23110073430.1 Alkaloid CODM/T6ODM medium borderline
Jnigscaffold23250074490.1 Alkaloid CODM/T6ODM medium borderline
Jnigscaffold23700077810.1 Alkaloid CODM/T6ODM medium borderline
Jnigscaffold24660082630.1 Alkaloid CODM/T6ODM medium borderline
Jnigscaffold25020085070.2 Alkaloid CODM/T6ODM medium borderline
Jnigscaffold25400086770.1 Alkaloid CODM/T6ODM medium borderline
Jnigscaffold2540086410.1 Alkaloid CODM/T6ODM medium borderline
Jnigscaffold25980090020.1 Alkaloid CODM/T6ODM medium borderline
Jnigscaffold27540099960.1 Alkaloid CODM/T6ODM medium borderline
Jnigscaffold27960103130.1 Alkaloid CODM/T6ODM medium borderline
Jnigscaffold30970117070.1 Alkaloid CODM/T6ODM medium borderline
Jnigscaffold31520120460.1 Alkaloid CODM/T6ODM medium borderline
Jnigscaffold32430123310.1 Alkaloid CODM/T6ODM medium borderline
Jnigscaffold33520126930.1 Alkaloid CODM/T6ODM medium borderline
Jnigscaffold33620127130.1 Alkaloid CODM/T6ODM medium borderline
Jnigscaffold33620127600.1 Alkaloid CODM/T6ODM medium borderline
Jnigscaffold33640128150.1 Alkaloid CODM/T6ODM medium borderline
Jnigscaffold34370131090.1 Alkaloid CODM/T6ODM medium borderline
Jnigscaffold3620136260.1 Alkaloid CODM/T6ODM medium borderline
Jnigscaffold36360137210.1 Alkaloid CODM/T6ODM medium borderline
Jnigscaffold37740143040.1 Alkaloid CODM/T6ODM medium borderline
Jnigscaffold38450144910.1 Alkaloid CODM/T6ODM low borderline
Jnigscaffold3850145430.1 Alkaloid CODM/T6ODM medium borderline
Jnigscaffold40140149800.1 Alkaloid CODM/T6ODM medium borderline
Jnigscaffold40670151530.1 Alkaloid CODM/T6ODM low borderline
Jnigscaffold41160153130.1 Alkaloid CODM/T6ODM medium borderline
Jnigscaffold42090157400.1 Alkaloid CODM/T6ODM medium borderline
Jnigscaffold44200163030.1 Alkaloid CODM/T6ODM medium borderline
Jnigscaffold45530167070.1 Alkaloid CODM/T6ODM medium borderline
Jnigscaffold46450170030.1 Alkaloid CODM/T6ODM medium borderline
Jnigscaffold46780171120.1 Alkaloid CODM/T6ODM medium borderline
Jnigscaffold47290172560.1 Alkaloid CODM/T6ODM medium borderline
Jnigscaffold50000181460.1 Alkaloid CODM/T6ODM low borderline
Jnigscaffold52590187250.1 Alkaloid CODM/T6ODM medium borderline
Jnigscaffold53840191400.1 Alkaloid CODM/T6ODM medium borderline
Jnigscaffold54530193760.1 Alkaloid CODM/T6ODM medium borderline
Jnigscaffold55470196320.1 Alkaloid CODM/T6ODM medium borderline
Jnigscaffold55470196640.1 Alkaloid CODM/T6ODM medium borderline
Jnigscaffold56310198730.1 Alkaloid CODM/T6ODM medium borderline