PlantSME Plant secondary metabolism enzyme database

Juglans nigra (juglans_nigra)

Imported from atlas release summary for Juglans nigra.

2125
Candidate Protein Records
1793
Pathway-Level Records
4519
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 494 19 BAHD (179) View species results
Phenylpropanoid pathway 393 11 POD (147) View species results
Alkaloid pathway 383 23 7DLGT (71) View species results
Flavonoid pathway 245 10 UFGT (152) View species results
Rosmarinic acid pathway 166 7 C4H (68) View species results
Steroid pathway 112 12 CAS (46) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 1742 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 315 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Rosmarinic acid pathway
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Protein/Isoform Record Pathway Family Confidence Status
Jnigscaffold86870267490.1 Rosmarinic Acid C4H low borderline
Jnigscaffold87070268380.1 Rosmarinic Acid C4H medium pass
Jnigscaffold88020269900.1 Rosmarinic Acid C4H medium pass
Jnigscaffold8820270070.1 Rosmarinic Acid C4H low borderline
Jnigscaffold8980274310.1 Rosmarinic Acid C4H medium pass
Jnigscaffold90390275340.2 Rosmarinic Acid C4H medium pass
Jnigscaffold90390275340.3 Rosmarinic Acid C4H low borderline
Jnigscaffold91100276910.1 Rosmarinic Acid C4H medium pass
Jnigscaffold91380277670.2 Rosmarinic Acid C4H medium pass
Jnigscaffold91420277910.1 Rosmarinic Acid C4H low borderline
Jnigscaffold91450278020.1 Rosmarinic Acid C4H low borderline
Jnigscaffold91670279020.1 Rosmarinic Acid C4H low borderline
Jnigscaffold91710279510.1 Rosmarinic Acid C4H low borderline
Jnigscaffold91730279650.1 Rosmarinic Acid C4H low borderline
Jnigscaffold10050021150.1 Rosmarinic Acid CPR medium pass
Jnigscaffold1250032670.1 Rosmarinic Acid CPR medium pass
Jnigscaffold19960062130.1 Rosmarinic Acid CPR low borderline
Jnigscaffold23110073450.1 Rosmarinic Acid CPR medium pass
Jnigscaffold23490076930.1 Rosmarinic Acid CPR low borderline
Jnigscaffold26210090680.1 Rosmarinic Acid CPR medium pass
Jnigscaffold2660092400.1 Rosmarinic Acid CPR medium pass
Jnigscaffold30450114320.1 Rosmarinic Acid CPR medium pass
Jnigscaffold42220158020.1 Rosmarinic Acid CPR medium pass
Jnigscaffold52590187490.1 Rosmarinic Acid CPR low borderline
Jnigscaffold53340189240.1 Rosmarinic Acid CPR medium pass
Jnigscaffold5720200880.1 Rosmarinic Acid CPR medium pass
Jnigscaffold65850221510.1 Rosmarinic Acid CPR low borderline
Jnigscaffold70530232750.1 Rosmarinic Acid CPR medium pass
Jnigscaffold76200247970.1 Rosmarinic Acid CPR medium pass
Jnigscaffold8950273670.1 Rosmarinic Acid CPR medium pass
JnigC5444130017270.1 Rosmarinic Acid HPPR medium pass
Jnigscaffold14710042170.1 Rosmarinic Acid HPPR medium pass
Jnigscaffold16260048510.1 Rosmarinic Acid HPPR medium pass
Jnigscaffold33710128890.3 Rosmarinic Acid HPPR medium pass
Jnigscaffold38450145310.1 Rosmarinic Acid HPPR medium pass
Jnigscaffold61920211860.2 Rosmarinic Acid HPPR medium pass
JnigC5438150013430.1 Rosmarinic Acid PAL high pass
Jnigscaffold24920084150.2 Rosmarinic Acid PAL high pass
Jnigscaffold33410126590.1 Rosmarinic Acid PAL high pass
Jnigscaffold59480207290.1 Rosmarinic Acid PAL high pass
Jnigscaffold64280216980.1 Rosmarinic Acid PAL high pass
Jnigscaffold87210268430.1 Rosmarinic Acid PAL high pass
JnigC5386230004770.1 Rosmarinic Acid RAS medium pass
JnigC5445790018880.1 Rosmarinic Acid RAS low borderline
Jnigscaffold13760037300.1 Rosmarinic Acid RAS low borderline
Jnigscaffold15470043970.1 Rosmarinic Acid RAS medium pass
Jnigscaffold17720053580.1 Rosmarinic Acid RAS low borderline
Jnigscaffold21390066680.1 Rosmarinic Acid RAS low borderline
Jnigscaffold27670100560.1 Rosmarinic Acid RAS low borderline
Jnigscaffold27780101470.1 Rosmarinic Acid RAS low borderline