PlantSME Plant secondary metabolism enzyme database

Juglans regia (juglans_regia)

Imported from atlas release summary for Juglans regia.

2303
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 652 20 BAHD (258) View species results
Alkaloid pathway 526 24 7DLGT (80) View species results
Phenylpropanoid pathway 459 11 POD (181) View species results
Flavonoid pathway 278 12 UFGT (175) View species results
Rosmarinic acid pathway 209 7 C4H (86) View species results
Steroid pathway 179 11 CAS (88) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1907 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 405 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Rosmarinic acid pathway
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Gene Pathway Family Confidence Status
Jreg12G0017180.1 Rosmarinic Acid 4CL low borderline
Jreg12G0017180.2 Rosmarinic Acid 4CL medium pass
Jreg12G0017190.1 Rosmarinic Acid 4CL low borderline
Jreg12G0017190.2 Rosmarinic Acid 4CL medium pass
Jreg13G0005200.1 Rosmarinic Acid 4CL medium pass
Jreg13G0011460.1 Rosmarinic Acid 4CL medium pass
Jreg13G0011470.1 Rosmarinic Acid 4CL medium pass
Jreg13G0023910.1 Rosmarinic Acid 4CL medium pass
Jreg13G0024170.1 Rosmarinic Acid 4CL low borderline
Jreg14G0013350.1 Rosmarinic Acid 4CL medium pass
Jreg15G0002170.1 Rosmarinic Acid 4CL medium pass
Jreg16G0003390.1 Rosmarinic Acid 4CL low borderline
Jreg16G0003400.1 Rosmarinic Acid 4CL low borderline
Jreg16G0003410.1 Rosmarinic Acid 4CL low borderline
Jreg16G0003420.1 Rosmarinic Acid 4CL low borderline
Jreg16G0016770.1 Rosmarinic Acid 4CL low borderline
Jreg16G0017460.1 Rosmarinic Acid 4CL medium pass
Jreg01G0005190.1 Rosmarinic Acid C4H low borderline
Jreg01G0006720.1 Rosmarinic Acid C4H low borderline
Jreg01G0014700.1 Rosmarinic Acid C4H low borderline
Jreg01G0014800.1 Rosmarinic Acid C4H medium pass
Jreg01G0014810.1 Rosmarinic Acid C4H medium pass
Jreg01G0014820.1 Rosmarinic Acid C4H medium pass
Jreg01G0014830.1 Rosmarinic Acid C4H medium pass
Jreg01G0014880.1 Rosmarinic Acid C4H medium pass
Jreg01G0014930.1 Rosmarinic Acid C4H low borderline
Jreg01G0014940.1 Rosmarinic Acid C4H medium pass
Jreg01G0014950.1 Rosmarinic Acid C4H medium pass
Jreg01G0014970.1 Rosmarinic Acid C4H low borderline
Jreg01G0014980.1 Rosmarinic Acid C4H low borderline
Jreg01G0015800.1 Rosmarinic Acid C4H medium pass
Jreg01G0023410.1 Rosmarinic Acid C4H medium pass
Jreg01G0023660.1 Rosmarinic Acid C4H low borderline
Jreg01G0026900.1 Rosmarinic Acid C4H medium pass
Jreg01G0027160.1 Rosmarinic Acid C4H low borderline
Jreg01G0031660.1 Rosmarinic Acid C4H medium pass
Jreg01G0031660.2 Rosmarinic Acid C4H low borderline
Jreg02G0001630.1 Rosmarinic Acid C4H low borderline
Jreg02G0001730.1 Rosmarinic Acid C4H low borderline
Jreg02G0001750.1 Rosmarinic Acid C4H low borderline
Jreg02G0001770.1 Rosmarinic Acid C4H low borderline
Jreg02G0001790.1 Rosmarinic Acid C4H low borderline
Jreg02G0001800.1 Rosmarinic Acid C4H medium pass
Jreg02G0001800.2 Rosmarinic Acid C4H low borderline
Jreg02G0001810.1 Rosmarinic Acid C4H low borderline
Jreg02G0001820.1 Rosmarinic Acid C4H medium pass
Jreg02G0001860.1 Rosmarinic Acid C4H low borderline
Jreg02G0001870.1 Rosmarinic Acid C4H medium pass
Jreg02G0001870.2 Rosmarinic Acid C4H medium pass
Jreg02G0001880.1 Rosmarinic Acid C4H medium pass