PlantSME Plant secondary metabolism enzyme database

Juglans regia (juglans_regia)

Imported from atlas release summary for Juglans regia.

2303
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 652 20 BAHD (258) View species results
Alkaloid pathway 526 24 7DLGT (80) View species results
Phenylpropanoid pathway 459 11 POD (181) View species results
Flavonoid pathway 278 12 UFGT (175) View species results
Rosmarinic acid pathway 209 7 C4H (86) View species results
Steroid pathway 179 11 CAS (88) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1907 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 405 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Rosmarinic acid pathway
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Gene Pathway Family Confidence Status
Jreg02G0001900.1 Rosmarinic Acid C4H low borderline
Jreg02G0001910.1 Rosmarinic Acid C4H low borderline
Jreg02G0001920.1 Rosmarinic Acid C4H low borderline
Jreg02G0001930.1 Rosmarinic Acid C4H medium pass
Jreg02G0001940.1 Rosmarinic Acid C4H low borderline
Jreg02G0005880.1 Rosmarinic Acid C4H low borderline
Jreg02G0006430.1 Rosmarinic Acid C4H low borderline
Jreg02G0008300.1 Rosmarinic Acid C4H low borderline
Jreg02G0008310.1 Rosmarinic Acid C4H low borderline
Jreg02G0008330.1 Rosmarinic Acid C4H low borderline
Jreg02G0009610.1 Rosmarinic Acid C4H low borderline
Jreg02G0009710.1 Rosmarinic Acid C4H low borderline
Jreg02G0009720.1 Rosmarinic Acid C4H low borderline
Jreg02G0009770.1 Rosmarinic Acid C4H low borderline
Jreg02G0009770.2 Rosmarinic Acid C4H low borderline
Jreg02G0009800.1 Rosmarinic Acid C4H low borderline
Jreg02G0010280.1 Rosmarinic Acid C4H low borderline
Jreg02G0010300.1 Rosmarinic Acid C4H low borderline
Jreg02G0011280.1 Rosmarinic Acid C4H low borderline
Jreg02G0011330.1 Rosmarinic Acid C4H low borderline
Jreg02G0013750.1 Rosmarinic Acid C4H low borderline
Jreg02G0017260.1 Rosmarinic Acid C4H medium pass
Jreg02G0017270.1 Rosmarinic Acid C4H medium pass
Jreg02G0017280.1 Rosmarinic Acid C4H medium pass
Jreg02G0017290.1 Rosmarinic Acid C4H medium pass
Jreg02G0017290.2 Rosmarinic Acid C4H low borderline
Jreg02G0017290.3 Rosmarinic Acid C4H low borderline
Jreg02G0017730.1 Rosmarinic Acid C4H low borderline
Jreg02G0017740.1 Rosmarinic Acid C4H low borderline
Jreg02G0017750.1 Rosmarinic Acid C4H low borderline
Jreg02G0017770.1 Rosmarinic Acid C4H low borderline
Jreg02G0017780.1 Rosmarinic Acid C4H low borderline
Jreg02G0017790.1 Rosmarinic Acid C4H low borderline
Jreg02G0017820.1 Rosmarinic Acid C4H medium pass
Jreg02G0017830.1 Rosmarinic Acid C4H low borderline
Jreg02G0017890.1 Rosmarinic Acid C4H low borderline
Jreg02G0023340.1 Rosmarinic Acid C4H low borderline
Jreg02G0023350.1 Rosmarinic Acid C4H low borderline
Jreg03G0000900.1 Rosmarinic Acid C4H medium pass
Jreg03G0001320.1 Rosmarinic Acid C4H low borderline
Jreg03G0003710.1 Rosmarinic Acid C4H medium pass
Jreg03G0003720.1 Rosmarinic Acid C4H low borderline
Jreg03G0003730.1 Rosmarinic Acid C4H medium pass
Jreg03G0003740.1 Rosmarinic Acid C4H low borderline
Jreg03G0003750.1 Rosmarinic Acid C4H medium pass
Jreg03G0005670.1 Rosmarinic Acid C4H medium pass
Jreg03G0005680.1 Rosmarinic Acid C4H medium pass
Jreg03G0009840.1 Rosmarinic Acid C4H low borderline
Jreg03G0011670.1 Rosmarinic Acid C4H low borderline
Jreg03G0011680.1 Rosmarinic Acid C4H low borderline