Leptotheca gaudichaudii (leptotheca_gaudichaudii)

This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.

Pathway Coverage

6 Pathways

Phenylpropanoid pathway 24.35% Terpenoid pathway 22.98% Alkaloid pathway 22.53% Flavonoid pathway 12.94% Rosmarinic acid pathway 10.81% Steroid pathway 6.39%

Family Distribution

657 Candidate Genes

C4H 6.73% 4CL 6.14% C3'H/CYP98A 5.87% BAHD 5.38% POD 4.47% CYP76 4.2% IFS 3.39% NMT 3.12%

Other Families 60.71%

More Families (96)

GS 52 2.8% BR6OX2/CYP85A2 51 2.74% STR 48 2.58% T3O 45 2.42% F3H 45 2.42% IFR 44 2.37% DWF4/CYP90B1 41 2.21% F3'H/CYP75B 38 2.05% PAL 33 1.78% UGT 33 1.78% UFGT 32 1.72% 7DLGT 31 1.67% PYKS 29 1.56% TRI/TRII 27 1.45% CAD 27 1.45% SMT1/SMT2/SMT3 26 1.4% IO 22 1.18% CODM/T6ODM 21 1.13% H6H 21 1.13% CYP71 20 1.08% CHS 19 1.02% SLS 17 0.91% CNMT 15 0.81% CAS 15 0.81% NCS 14 0.75% T16H 13 0.7% CPD/CYP90A1 13 0.7% 7DLH 12 0.65% FNS 12 0.65% F3'5'H/CYP75A 12 0.65% HCT 12 0.65% COMT 12 0.65% CYP90D1 12 0.65% CSE 11 0.59% LAC 10 0.54% BBE 9 0.48% COR 9 0.48% 16OMT 9 0.48% ANR 9 0.48% RAS 9 0.48% BR6OX1/CYP85A1 9 0.48% CYP719 8 0.43% G8O/G8H 8 0.43% 8HGO 7 0.38% PMT 7 0.38% SGD 7 0.38% CPR 7 0.38% AACT 7 0.38% CCR 6 0.32% TAT 6 0.32% SQS/FDFT1 6 0.32% GGPPS 6 0.32% LAMT 5 0.27% TDC 5 0.27% DWF5 5 0.27% SQE 5 0.27% CYP80F1 4 0.22% CYP80B1 4 0.22% MPO 4 0.22% CHI 4 0.22% DFR 4 0.22% F5H/CYP84A 4 0.22% DET2 4 0.22% MCT/IspD 4 0.22% GES 3 0.16% TYDC_DDC 3 0.16% ROT3/CYP90C1 3 0.16% MVK 3 0.16% DXR 3 0.16% TPS 3 0.16% HMGR 3 0.16% FPPS 3 0.16% MVD 3 0.16% 6OMT_4OMT_SOMT 2 0.11% FLS 2 0.11% ANS/LDOX 2 0.11% CCoAOMT 2 0.11% CYP51G1 2 0.11% HYD1 2 0.11% SMO1/SMO2 2 0.11% CPI1 2 0.11% DXS 2 0.11% HDR/IspH 2 0.11% MDS/IspF 2 0.11% HDS/IspG 2 0.11% ODC 1 0.05% ISY 1 0.05% ADC 1 0.05% HPPR 1 0.05% FK 1 0.05% DWF7 1 0.05% DWF1 1 0.05% IDI 1 0.05% CMK/IspE 1 0.05% HMGS 1 0.05% PMK 1 0.05%

Species Pathway Results

The links below show identification results for this species within each pathway, instead of opening the global pathway overview.

Pathway	Candidate Genes	Families	Top family	Results
Phenylpropanoid pathway	160	11	POD (79)	View species results
Terpenoid pathway	151	19	BAHD (65)	View species results
Alkaloid pathway	148	20	NMT (28)	View species results
Flavonoid pathway	85	9	UFGT (26)	View species results
Rosmarinic acid pathway	71	7	C4H (29)	View species results
Steroid pathway	42	12	CAS (13)	View species results

Broad Catalytic Groups

P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.

Catalytic group	Families	Candidate genes	Included families
P450/oxygenase	24	713	7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase	3	121	BAHD, HCT, RAS

Identification Result List

Search the public identification results for this species; click pathway or family legends above to narrow within this species.

Current family filter: CAD

Gene	Pathway	Family	Confidence	Status	Best Target
Lgau1392150003920	Phenylpropanoid	CAD	medium	borderline	CAD__00005__sp_G7IYC1_CAD2_MEDTR
Lgau1447110018440	Phenylpropanoid	CAD	medium	pass	CAD__00012__sp_Q02972_CADH8_ARATH
Lgau1447110018450	Phenylpropanoid	CAD	medium	pass	CAD__00002__sp_A0A0U4AHM6_CAD2_RAUSE
Lgau1492660025290	Phenylpropanoid	CAD	low	borderline	CAD__00017__sp_Q9SJ25_CADH2_ARATH
Lgau1612450027290	Phenylpropanoid	CAD	low	borderline	CAD__00007__sp_O24562_CADH_MAIZE
Lgau1629520034680	Phenylpropanoid	CAD	low	borderline	CAD__00008__sp_O49482_CADH5_ARATH
Lgau1652150036860	Phenylpropanoid	CAD	medium	pass	CAD__00012__sp_Q02972_CADH8_ARATH
Lgau2075550081100	Phenylpropanoid	CAD	medium	pass	CAD__00012__sp_Q02972_CADH8_ARATH
Lgau2141030113770	Phenylpropanoid	CAD	low	borderline	CAD__00015__sp_Q6ZHS4_CADH2_ORYSJ
Lgau2144560117170	Phenylpropanoid	CAD	medium	borderline	CAD__00005__sp_G7IYC1_CAD2_MEDTR
Lgau2165700137930	Phenylpropanoid	CAD	medium	borderline	CAD__00005__sp_G7IYC1_CAD2_MEDTR
Lgau2167080141390	Phenylpropanoid	CAD	low	borderline	CAD__00008__sp_O49482_CADH5_ARATH
Lgau2167630142770	Phenylpropanoid	CAD	low	borderline	CAD__00015__sp_Q6ZHS4_CADH2_ORYSJ
Lgau2169600146390	Phenylpropanoid	CAD	low	borderline	CAD__00015__sp_Q6ZHS4_CADH2_ORYSJ
Lgau2169650146580	Phenylpropanoid	CAD	medium	pass	CAD__00002__sp_A0A0U4AHM6_CAD2_RAUSE
Lgau2174370150630	Phenylpropanoid	CAD	low	borderline	CAD__00004__sp_B5LAT8_CAD1_CAPAN
Lgau2180440162790	Phenylpropanoid	CAD	medium	borderline	CAD__00005__sp_G7IYC1_CAD2_MEDTR
Lgau2180710164120	Phenylpropanoid	CAD	medium	borderline	CAD__00005__sp_G7IYC1_CAD2_MEDTR
Lgau2184340172480	Phenylpropanoid	CAD	medium	pass	CAD__00009__sp_P42734_CADH9_ARATH
Lgau2186790174990	Phenylpropanoid	CAD	low	borderline	CAD__00001__sp_A0A072VPZ8_CAD1_MEDTR
Lgau2195250197600	Phenylpropanoid	CAD	low	borderline	CAD__00015__sp_Q6ZHS4_CADH2_ORYSJ
Lgau2195440198140	Phenylpropanoid	CAD	low	borderline	CAD__00004__sp_B5LAT8_CAD1_CAPAN
Lgau2199300211350	Phenylpropanoid	CAD	medium	pass	CAD__00002__sp_A0A0U4AHM6_CAD2_RAUSE
Lgau2205910232200	Phenylpropanoid	CAD	medium	pass	CAD__00012__sp_Q02972_CADH8_ARATH
Lgau2210630250680	Phenylpropanoid	CAD	low	borderline	CAD__00004__sp_B5LAT8_CAD1_CAPAN
Lgau2213230261460	Phenylpropanoid	CAD	medium	pass	CAD__00002__sp_A0A0U4AHM6_CAD2_RAUSE
Lgau2216150272020	Phenylpropanoid	CAD	low	borderline	CAD__00015__sp_Q6ZHS4_CADH2_ORYSJ