Leptotheca gaudichaudii (leptotheca_gaudichaudii)

This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.

Pathway Coverage

6 Pathways

Phenylpropanoid pathway 24.35% Terpenoid pathway 22.98% Alkaloid pathway 22.53% Flavonoid pathway 12.94% Rosmarinic acid pathway 10.81% Steroid pathway 6.39%

Family Distribution

657 Candidate Genes

C4H 6.73% 4CL 6.14% C3'H/CYP98A 5.87% BAHD 5.38% POD 4.47% CYP76 4.2% IFS 3.39% NMT 3.12%

Other Families 60.71%

More Families (96)

GS 52 2.8% BR6OX2/CYP85A2 51 2.74% STR 48 2.58% T3O 45 2.42% F3H 45 2.42% IFR 44 2.37% DWF4/CYP90B1 41 2.21% F3'H/CYP75B 38 2.05% PAL 33 1.78% UGT 33 1.78% UFGT 32 1.72% 7DLGT 31 1.67% PYKS 29 1.56% TRI/TRII 27 1.45% CAD 27 1.45% SMT1/SMT2/SMT3 26 1.4% IO 22 1.18% CODM/T6ODM 21 1.13% H6H 21 1.13% CYP71 20 1.08% CHS 19 1.02% SLS 17 0.91% CNMT 15 0.81% CAS 15 0.81% NCS 14 0.75% T16H 13 0.7% CPD/CYP90A1 13 0.7% 7DLH 12 0.65% FNS 12 0.65% F3'5'H/CYP75A 12 0.65% HCT 12 0.65% COMT 12 0.65% CYP90D1 12 0.65% CSE 11 0.59% LAC 10 0.54% BBE 9 0.48% COR 9 0.48% 16OMT 9 0.48% ANR 9 0.48% RAS 9 0.48% BR6OX1/CYP85A1 9 0.48% CYP719 8 0.43% G8O/G8H 8 0.43% 8HGO 7 0.38% PMT 7 0.38% SGD 7 0.38% CPR 7 0.38% AACT 7 0.38% CCR 6 0.32% TAT 6 0.32% SQS/FDFT1 6 0.32% GGPPS 6 0.32% LAMT 5 0.27% TDC 5 0.27% DWF5 5 0.27% SQE 5 0.27% CYP80F1 4 0.22% CYP80B1 4 0.22% MPO 4 0.22% CHI 4 0.22% DFR 4 0.22% F5H/CYP84A 4 0.22% DET2 4 0.22% MCT/IspD 4 0.22% GES 3 0.16% TYDC_DDC 3 0.16% ROT3/CYP90C1 3 0.16% MVK 3 0.16% DXR 3 0.16% TPS 3 0.16% HMGR 3 0.16% FPPS 3 0.16% MVD 3 0.16% 6OMT_4OMT_SOMT 2 0.11% FLS 2 0.11% ANS/LDOX 2 0.11% CCoAOMT 2 0.11% CYP51G1 2 0.11% HYD1 2 0.11% SMO1/SMO2 2 0.11% CPI1 2 0.11% DXS 2 0.11% HDR/IspH 2 0.11% MDS/IspF 2 0.11% HDS/IspG 2 0.11% ODC 1 0.05% ISY 1 0.05% ADC 1 0.05% HPPR 1 0.05% FK 1 0.05% DWF7 1 0.05% DWF1 1 0.05% IDI 1 0.05% CMK/IspE 1 0.05% HMGS 1 0.05% PMK 1 0.05%

Species Pathway Results

The links below show identification results for this species within each pathway, instead of opening the global pathway overview.

Pathway	Candidate Genes	Families	Top family	Results
Phenylpropanoid pathway	160	11	POD (79)	View species results
Terpenoid pathway	151	19	BAHD (65)	View species results
Alkaloid pathway	148	20	NMT (28)	View species results
Flavonoid pathway	85	9	UFGT (26)	View species results
Rosmarinic acid pathway	71	7	C4H (29)	View species results
Steroid pathway	42	12	CAS (13)	View species results

Broad Catalytic Groups

P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.

Catalytic group	Families	Candidate genes	Included families
P450/oxygenase	24	713	7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase	3	121	BAHD, HCT, RAS

Identification Result List

Search the public identification results for this species; click pathway or family legends above to narrow within this species.

Current family filter: PAL

Gene	Pathway	Family	Confidence	Status	Best Target
Lgau1888860052510	Flavonoid	PAL	high	pass	PAL__00009__sp_Q9SS45_PAL4_ARATH
Lgau2146190119950	Flavonoid	PAL	high	pass	PAL__00002__sp_P35510_PAL1_ARATH
Lgau2165100135900	Flavonoid	PAL	high	pass	PAL__00009__sp_Q9SS45_PAL4_ARATH
Lgau2183140169840	Flavonoid	PAL	high	pass	PAL__00001__sp_P24481_PAL1_PETCR
Lgau2183890171420	Flavonoid	PAL	high	pass	PAL__00009__sp_Q9SS45_PAL4_ARATH
Lgau2194950196150	Flavonoid	PAL	high	pass	PAL__00009__sp_Q9SS45_PAL4_ARATH
Lgau2197430204390	Flavonoid	PAL	high	pass	PAL__00001__sp_P24481_PAL1_PETCR
Lgau2211620254560	Flavonoid	PAL	high	pass	PAL__00001__sp_P24481_PAL1_PETCR
Lgau2213060261140	Flavonoid	PAL	high	pass	PAL__00001__sp_P24481_PAL1_PETCR
Lgau2215420270270	Flavonoid	PAL	high	pass	PAL__00009__sp_Q9SS45_PAL4_ARATH
Lgau2216200272410	Flavonoid	PAL	high	pass	PAL__00009__sp_Q9SS45_PAL4_ARATH
Lgau1888860052510	Phenylpropanoid	PAL	high	pass	PAL__00009__sp_Q9SS45_PAL4_ARATH
Lgau2146190119950	Phenylpropanoid	PAL	high	pass	PAL__00002__sp_P35510_PAL1_ARATH
Lgau2165100135900	Phenylpropanoid	PAL	high	pass	PAL__00009__sp_Q9SS45_PAL4_ARATH
Lgau2183140169840	Phenylpropanoid	PAL	high	pass	PAL__00001__sp_P24481_PAL1_PETCR
Lgau2183890171420	Phenylpropanoid	PAL	high	pass	PAL__00009__sp_Q9SS45_PAL4_ARATH
Lgau2194950196150	Phenylpropanoid	PAL	high	pass	PAL__00009__sp_Q9SS45_PAL4_ARATH
Lgau2197430204390	Phenylpropanoid	PAL	high	pass	PAL__00001__sp_P24481_PAL1_PETCR
Lgau2211620254560	Phenylpropanoid	PAL	high	pass	PAL__00001__sp_P24481_PAL1_PETCR
Lgau2213060261140	Phenylpropanoid	PAL	high	pass	PAL__00001__sp_P24481_PAL1_PETCR
Lgau2215420270270	Phenylpropanoid	PAL	high	pass	PAL__00009__sp_Q9SS45_PAL4_ARATH
Lgau2216200272410	Phenylpropanoid	PAL	high	pass	PAL__00009__sp_Q9SS45_PAL4_ARATH
Lgau1888860052510	Rosmarinic Acid	PAL	high	pass	PAL__00009__sp_Q9SS45_PAL4_ARATH
Lgau2146190119950	Rosmarinic Acid	PAL	high	pass	PAL__00002__sp_P35510_PAL1_ARATH
Lgau2165100135900	Rosmarinic Acid	PAL	high	pass	PAL__00009__sp_Q9SS45_PAL4_ARATH
Lgau2183140169840	Rosmarinic Acid	PAL	high	pass	PAL__00001__sp_P24481_PAL1_PETCR
Lgau2183890171420	Rosmarinic Acid	PAL	high	pass	PAL__00009__sp_Q9SS45_PAL4_ARATH
Lgau2194950196150	Rosmarinic Acid	PAL	high	pass	PAL__00009__sp_Q9SS45_PAL4_ARATH
Lgau2197430204390	Rosmarinic Acid	PAL	high	pass	PAL__00001__sp_P24481_PAL1_PETCR
Lgau2211620254560	Rosmarinic Acid	PAL	high	pass	PAL__00001__sp_P24481_PAL1_PETCR
Lgau2213060261140	Rosmarinic Acid	PAL	high	pass	PAL__00001__sp_P24481_PAL1_PETCR
Lgau2215420270270	Rosmarinic Acid	PAL	high	pass	PAL__00009__sp_Q9SS45_PAL4_ARATH
Lgau2216200272410	Rosmarinic Acid	PAL	high	pass	PAL__00009__sp_Q9SS45_PAL4_ARATH