Leptotheca gaudichaudii (leptotheca_gaudichaudii)
Imported from atlas release summary for Leptotheca gaudichaudii.
657
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
6
Pathways
Family Distribution
657
Candidate Genes
C4H
6.73%
4CL
6.14%
C3'H/CYP98A
5.87%
BAHD
5.38%
POD
4.47%
CYP76
4.2%
IFS
3.39%
NMT
3.12%
Other Families
60.71%
More Families (96)
GS
52
2.8%
BR6OX2/CYP85A2
51
2.74%
STR
48
2.58%
T3O
45
2.42%
F3H
45
2.42%
IFR
44
2.37%
DWF4/CYP90B1
41
2.21%
F3'H/CYP75B
38
2.05%
PAL
33
1.78%
UGT
33
1.78%
UFGT
32
1.72%
7DLGT
31
1.67%
PYKS
29
1.56%
TRI/TRII
27
1.45%
CAD
27
1.45%
SMT1/SMT2/SMT3
26
1.4%
IO
22
1.18%
CODM/T6ODM
21
1.13%
H6H
21
1.13%
CYP71
20
1.08%
CHS
19
1.02%
SLS
17
0.91%
CNMT
15
0.81%
CAS
15
0.81%
NCS
14
0.75%
T16H
13
0.7%
CPD/CYP90A1
13
0.7%
7DLH
12
0.65%
FNS
12
0.65%
F3'5'H/CYP75A
12
0.65%
HCT
12
0.65%
COMT
12
0.65%
CYP90D1
12
0.65%
CSE
11
0.59%
LAC
10
0.54%
BBE
9
0.48%
COR
9
0.48%
16OMT
9
0.48%
ANR
9
0.48%
RAS
9
0.48%
BR6OX1/CYP85A1
9
0.48%
CYP719
8
0.43%
G8O/G8H
8
0.43%
8HGO
7
0.38%
PMT
7
0.38%
SGD
7
0.38%
CPR
7
0.38%
AACT
7
0.38%
CCR
6
0.32%
TAT
6
0.32%
SQS/FDFT1
6
0.32%
GGPPS
6
0.32%
LAMT
5
0.27%
TDC
5
0.27%
DWF5
5
0.27%
SQE
5
0.27%
CYP80F1
4
0.22%
CYP80B1
4
0.22%
MPO
4
0.22%
CHI
4
0.22%
DFR
4
0.22%
F5H/CYP84A
4
0.22%
DET2
4
0.22%
MCT/IspD
4
0.22%
GES
3
0.16%
TYDC_DDC
3
0.16%
ROT3/CYP90C1
3
0.16%
MVK
3
0.16%
DXR
3
0.16%
TPS
3
0.16%
HMGR
3
0.16%
FPPS
3
0.16%
MVD
3
0.16%
6OMT_4OMT_SOMT
2
0.11%
FLS
2
0.11%
ANS/LDOX
2
0.11%
CCoAOMT
2
0.11%
CYP51G1
2
0.11%
HYD1
2
0.11%
SMO1/SMO2
2
0.11%
CPI1
2
0.11%
DXS
2
0.11%
HDR/IspH
2
0.11%
MDS/IspF
2
0.11%
HDS/IspG
2
0.11%
ODC
1
0.05%
ISY
1
0.05%
ADC
1
0.05%
HPPR
1
0.05%
FK
1
0.05%
DWF7
1
0.05%
DWF1
1
0.05%
IDI
1
0.05%
CMK/IspE
1
0.05%
HMGS
1
0.05%
PMK
1
0.05%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Candidate Genes | Families | Top family | Results |
|---|---|---|---|---|
| Phenylpropanoid pathway | 160 | 11 | POD (79) | View species results |
| Terpenoid pathway | 151 | 19 | BAHD (65) | View species results |
| Alkaloid pathway | 148 | 20 | NMT (28) | View species results |
| Flavonoid pathway | 85 | 9 | UFGT (26) | View species results |
| Rosmarinic acid pathway | 71 | 7 | C4H (29) | View species results |
| Steroid pathway | 42 | 12 | CAS (13) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Families | Candidate genes | Included families |
|---|---|---|---|
| P450/oxygenase | 24 | 713 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 121 | BAHD, HCT, RAS |
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: NMT
| Gene | Pathway | Family | Confidence | Status | Best Target |
|---|---|---|---|---|---|
| Lgau1391890003750 | Alkaloid | NMT | medium | pass | NMT__00035__sp_Q6K431_TRX1_ORYSJ |
| Lgau1426780007690 | Alkaloid | NMT | medium | borderline | NMT__00023__sp_O82210_ANM12_ARATH |
| Lgau1431950011200 | Alkaloid | NMT | low | borderline | NMT__00035__sp_Q6K431_TRX1_ORYSJ |
| Lgau1438940016400 | Alkaloid | NMT | medium | pass | NMT__00024__sp_P0CB22_ATX2_ARATH |
| Lgau1449670018820 | Alkaloid | NMT | low | borderline | NMT__00056__sp_Q9FNE9_ATXR6_ARATH |
| Lgau1452670019260 | Alkaloid | NMT | low | borderline | NMT__00019__sp_O22781_SUVH2_ARATH |
| Lgau1623680029640 | Alkaloid | NMT | low | borderline | NMT__00024__sp_P0CB22_ATX2_ARATH |
| Lgau1641400035560 | Alkaloid | NMT | medium | pass | NMT__00016__sp_F4JNX3_CMKMT_ARATH |
| Lgau1778500045040 | Alkaloid | NMT | medium | borderline | NMT__00016__sp_F4JNX3_CMKMT_ARATH |
| Lgau1779590045990 | Alkaloid | NMT | medium | pass | NMT__00039__sp_Q84W92_ANM13_ARATH |
| Lgau1779730046260 | Alkaloid | NMT | low | borderline | NMT__00048__sp_Q8W595_SUVR4_ARATH |
| Lgau1884080050210 | Alkaloid | NMT | low | borderline | NMT__00028__sp_Q2LAE1_ASHH2_ARATH |
| Lgau1891060053580 | Alkaloid | NMT | medium | pass | NMT__00042__sp_Q8GZB6_SUVH4_ARATH |
| Lgau2010880070470 | Alkaloid | NMT | low | borderline | NMT__00020__sp_O23372_ATXR3_ARATH |
| Lgau2028080073190 | Alkaloid | NMT | low | borderline | NMT__00035__sp_Q6K431_TRX1_ORYSJ |
| Lgau2029340073710 | Alkaloid | NMT | medium | pass | NMT__00060__sp_Q9MAT5_ANM10_ARATH |
| Lgau2072750078760 | Alkaloid | NMT | low | borderline | NMT__00017__sp_F4K1J4_ATXR7_ARATH |
| Lgau2074840080300 | Alkaloid | NMT | medium | pass | NMT__00056__sp_Q9FNE9_ATXR6_ARATH |
| Lgau2075550081090 | Alkaloid | NMT | medium | pass | NMT__00041__sp_Q8GWT4_ANM15_ARATH |
| Lgau2119100094630 | Alkaloid | NMT | medium | borderline | NMT__00002__sp_A0A075D6M1_NNMT_RAUSE |
| Lgau2119410095120 | Alkaloid | NMT | low | borderline | NMT__00048__sp_Q8W595_SUVR4_ARATH |
| Lgau2123180102490 | Alkaloid | NMT | medium | pass | NMT__00068__sp_Q9XI84_RBCMT_ARATH |
| Lgau2139390112740 | Alkaloid | NMT | low | borderline | NMT__00039__sp_Q84W92_ANM13_ARATH |
| Lgau2144470116850 | Alkaloid | NMT | medium | pass | NMT__00061__sp_Q9SAH5_PLMT_ARATH |
| Lgau2146500120140 | Alkaloid | NMT | low | borderline | NMT__00035__sp_Q6K431_TRX1_ORYSJ |
| Lgau2158540129580 | Alkaloid | NMT | medium | pass | NMT__00016__sp_F4JNX3_CMKMT_ARATH |
| Lgau2160120131190 | Alkaloid | NMT | medium | borderline | NMT__00070__sp_W5U2K2_NMT_CATRO |
| Lgau2160810132840 | Alkaloid | NMT | low | borderline | NMT__00035__sp_Q6K431_TRX1_ORYSJ |
| Lgau2166150139350 | Alkaloid | NMT | low | borderline | NMT__00021__sp_O64827_SUVR5_ARATH |
| Lgau2175410152790 | Alkaloid | NMT | medium | borderline | NMT__00053__sp_Q9C6B9_PEAM3_ARATH |
| Lgau2181080164860 | Alkaloid | NMT | medium | borderline | NMT__00011__sp_A9X7L0_ANMT_RUTGR |
| Lgau2189560180770 | Alkaloid | NMT | medium | pass | NMT__00023__sp_O82210_ANM12_ARATH |
| Lgau2189840181620 | Alkaloid | NMT | medium | pass | NMT__00046__sp_Q8VZ17_SUVH6_ARATH |
| Lgau2194990196350 | Alkaloid | NMT | medium | pass | NMT__00028__sp_Q2LAE1_ASHH2_ARATH |
| Lgau2195660198940 | Alkaloid | NMT | medium | pass | NMT__00023__sp_O82210_ANM12_ARATH |
| Lgau2196920201790 | Alkaloid | NMT | low | borderline | NMT__00048__sp_Q8W595_SUVR4_ARATH |
| Lgau2201080216280 | Alkaloid | NMT | medium | borderline | NMT__00057__sp_Q9FR44_PEAM1_ARATH |
| Lgau2201310217060 | Alkaloid | NMT | medium | pass | NMT__00042__sp_Q8GZB6_SUVH4_ARATH |
| Lgau2202100218710 | Alkaloid | NMT | medium | pass | NMT__00021__sp_O64827_SUVR5_ARATH |
| Lgau2203290223080 | Alkaloid | NMT | low | borderline | NMT__00042__sp_Q8GZB6_SUVH4_ARATH |
| Lgau2203320223340 | Alkaloid | NMT | low | borderline | NMT__00068__sp_Q9XI84_RBCMT_ARATH |
| Lgau2203350223710 | Alkaloid | NMT | medium | pass | NMT__00025__sp_P93831_CLF_ARATH |
| Lgau2205430229270 | Alkaloid | NMT | low | borderline | NMT__00056__sp_Q9FNE9_ATXR6_ARATH |
| Lgau2206520234790 | Alkaloid | NMT | medium | pass | NMT__00032__sp_Q5PP37_ATXR2_ARATH |
| Lgau2207570238500 | Alkaloid | NMT | medium | pass | NMT__00039__sp_Q84W92_ANM13_ARATH |
| Lgau2207600238720 | Alkaloid | NMT | medium | pass | NMT__00048__sp_Q8W595_SUVR4_ARATH |
| Lgau2207930240640 | Alkaloid | NMT | medium | borderline | NMT__00070__sp_W5U2K2_NMT_CATRO |
| Lgau2210630250700 | Alkaloid | NMT | medium | pass | NMT__00060__sp_Q9MAT5_ANM10_ARATH |
| Lgau2211620254520 | Alkaloid | NMT | low | borderline | NMT__00016__sp_F4JNX3_CMKMT_ARATH |
| Lgau2212120256270 | Alkaloid | NMT | low | borderline | NMT__00028__sp_Q2LAE1_ASHH2_ARATH |