Leptotheca gaudichaudii (leptotheca_gaudichaudii)
Imported from atlas release summary for Leptotheca gaudichaudii.
657
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
6
Pathways
Family Distribution
657
Candidate Genes
C4H
6.73%
4CL
6.14%
C3'H/CYP98A
5.87%
BAHD
5.38%
POD
4.47%
CYP76
4.2%
IFS
3.39%
NMT
3.12%
Other Families
60.71%
More Families (96)
GS
52
2.8%
BR6OX2/CYP85A2
51
2.74%
STR
48
2.58%
T3O
45
2.42%
F3H
45
2.42%
IFR
44
2.37%
DWF4/CYP90B1
41
2.21%
F3'H/CYP75B
38
2.05%
PAL
33
1.78%
UGT
33
1.78%
UFGT
32
1.72%
7DLGT
31
1.67%
PYKS
29
1.56%
TRI/TRII
27
1.45%
CAD
27
1.45%
SMT1/SMT2/SMT3
26
1.4%
IO
22
1.18%
CODM/T6ODM
21
1.13%
H6H
21
1.13%
CYP71
20
1.08%
CHS
19
1.02%
SLS
17
0.91%
CNMT
15
0.81%
CAS
15
0.81%
NCS
14
0.75%
T16H
13
0.7%
CPD/CYP90A1
13
0.7%
7DLH
12
0.65%
FNS
12
0.65%
F3'5'H/CYP75A
12
0.65%
HCT
12
0.65%
COMT
12
0.65%
CYP90D1
12
0.65%
CSE
11
0.59%
LAC
10
0.54%
BBE
9
0.48%
COR
9
0.48%
16OMT
9
0.48%
ANR
9
0.48%
RAS
9
0.48%
BR6OX1/CYP85A1
9
0.48%
CYP719
8
0.43%
G8O/G8H
8
0.43%
8HGO
7
0.38%
PMT
7
0.38%
SGD
7
0.38%
CPR
7
0.38%
AACT
7
0.38%
CCR
6
0.32%
TAT
6
0.32%
SQS/FDFT1
6
0.32%
GGPPS
6
0.32%
LAMT
5
0.27%
TDC
5
0.27%
DWF5
5
0.27%
SQE
5
0.27%
CYP80F1
4
0.22%
CYP80B1
4
0.22%
MPO
4
0.22%
CHI
4
0.22%
DFR
4
0.22%
F5H/CYP84A
4
0.22%
DET2
4
0.22%
MCT/IspD
4
0.22%
GES
3
0.16%
TYDC_DDC
3
0.16%
ROT3/CYP90C1
3
0.16%
MVK
3
0.16%
DXR
3
0.16%
TPS
3
0.16%
HMGR
3
0.16%
FPPS
3
0.16%
MVD
3
0.16%
6OMT_4OMT_SOMT
2
0.11%
FLS
2
0.11%
ANS/LDOX
2
0.11%
CCoAOMT
2
0.11%
CYP51G1
2
0.11%
HYD1
2
0.11%
SMO1/SMO2
2
0.11%
CPI1
2
0.11%
DXS
2
0.11%
HDR/IspH
2
0.11%
MDS/IspF
2
0.11%
HDS/IspG
2
0.11%
ODC
1
0.05%
ISY
1
0.05%
ADC
1
0.05%
HPPR
1
0.05%
FK
1
0.05%
DWF7
1
0.05%
DWF1
1
0.05%
IDI
1
0.05%
CMK/IspE
1
0.05%
HMGS
1
0.05%
PMK
1
0.05%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Candidate Genes | Families | Top family | Results |
|---|---|---|---|---|
| Phenylpropanoid pathway | 160 | 11 | POD (79) | View species results |
| Terpenoid pathway | 151 | 19 | BAHD (65) | View species results |
| Alkaloid pathway | 148 | 20 | NMT (28) | View species results |
| Flavonoid pathway | 85 | 9 | UFGT (26) | View species results |
| Rosmarinic acid pathway | 71 | 7 | C4H (29) | View species results |
| Steroid pathway | 42 | 12 | CAS (13) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Families | Candidate genes | Included families |
|---|---|---|---|
| P450/oxygenase | 24 | 713 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 121 | BAHD, HCT, RAS |
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
| Gene | Pathway | Family | Confidence | Status |
|---|---|---|---|---|
| Lgau2139020111380 | Alkaloid | H6H | medium | borderline |
| Lgau2160740132650 | Alkaloid | H6H | medium | borderline |
| Lgau2164510134500 | Alkaloid | H6H | medium | pass |
| Lgau2166140139260 | Alkaloid | H6H | medium | borderline |
| Lgau2169460145780 | Alkaloid | H6H | medium | borderline |
| Lgau2185450172870 | Alkaloid | H6H | low | borderline |
| Lgau2189490180320 | Alkaloid | H6H | medium | borderline |
| Lgau2189760181310 | Alkaloid | H6H | medium | borderline |
| Lgau2193080193850 | Alkaloid | H6H | low | borderline |
| Lgau2198390206700 | Alkaloid | H6H | medium | borderline |
| Lgau2198590207960 | Alkaloid | H6H | medium | pass |
| Lgau2200530213880 | Alkaloid | H6H | medium | borderline |
| Lgau2204770227880 | Alkaloid | H6H | medium | borderline |
| Lgau2213920264320 | Alkaloid | H6H | low | borderline |
| Lgau2218290277880 | Alkaloid | H6H | medium | borderline |
| Lgau265640282040 | Alkaloid | H6H | low | borderline |
| Lgau1412320006640 | Alkaloid | IO | low | borderline |
| Lgau1426260007580 | Alkaloid | IO | medium | borderline |
| Lgau1452670019250 | Alkaloid | IO | medium | borderline |
| Lgau1887950052070 | Alkaloid | IO | medium | borderline |
| Lgau2015400072090 | Alkaloid | IO | medium | borderline |
| Lgau2034820076850 | Alkaloid | IO | low | borderline |
| Lgau2074400079780 | Alkaloid | IO | medium | borderline |
| Lgau2076370083000 | Alkaloid | IO | medium | borderline |
| Lgau2119410095130 | Alkaloid | IO | medium | borderline |
| Lgau2131400106400 | Alkaloid | IO | medium | borderline |
| Lgau2138040109740 | Alkaloid | IO | medium | borderline |
| Lgau2138150110070 | Alkaloid | IO | medium | borderline |
| Lgau2139220112150 | Alkaloid | IO | medium | borderline |
| Lgau2144210115810 | Alkaloid | IO | medium | borderline |
| Lgau2160070130990 | Alkaloid | IO | medium | borderline |
| Lgau2160070131000 | Alkaloid | IO | medium | borderline |
| Lgau2166160139360 | Alkaloid | IO | medium | borderline |
| Lgau2181360165670 | Alkaloid | IO | medium | borderline |
| Lgau2189790181340 | Alkaloid | IO | medium | borderline |
| Lgau2205450229320 | Alkaloid | IO | medium | borderline |
| Lgau2208270241840 | Alkaloid | IO | medium | borderline |
| Lgau2210640250870 | Alkaloid | IO | medium | borderline |
| Lgau2143450115250 | Alkaloid | ISY | medium | pass |
| Lgau1662550038050 | Alkaloid | LAMT | medium | borderline |
| Lgau1899840057260 | Alkaloid | LAMT | medium | pass |
| Lgau2211080252490 | Alkaloid | LAMT | medium | borderline |
| Lgau2218260277270 | Alkaloid | LAMT | medium | borderline |
| Lgau2218350278130 | Alkaloid | LAMT | low | borderline |
| Lgau2158000127200 | Alkaloid | MPO | medium | pass |
| Lgau2164580134830 | Alkaloid | MPO | medium | pass |
| Lgau2202170219250 | Alkaloid | MPO | high | pass |
| Lgau2209650248210 | Alkaloid | MPO | high | pass |
| Lgau1891170053620 | Alkaloid | NCS | medium | borderline |
| Lgau195740059850 | Alkaloid | NCS | medium | borderline |