Leptotheca gaudichaudii (leptotheca_gaudichaudii)
Imported from atlas release summary for Leptotheca gaudichaudii.
657
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
6
Pathways
Family Distribution
657
Candidate Genes
C4H
6.73%
4CL
6.14%
C3'H/CYP98A
5.87%
BAHD
5.38%
POD
4.47%
CYP76
4.2%
IFS
3.39%
NMT
3.12%
Other Families
60.71%
More Families (96)
GS
52
2.8%
BR6OX2/CYP85A2
51
2.74%
STR
48
2.58%
T3O
45
2.42%
F3H
45
2.42%
IFR
44
2.37%
DWF4/CYP90B1
41
2.21%
F3'H/CYP75B
38
2.05%
PAL
33
1.78%
UGT
33
1.78%
UFGT
32
1.72%
7DLGT
31
1.67%
PYKS
29
1.56%
TRI/TRII
27
1.45%
CAD
27
1.45%
SMT1/SMT2/SMT3
26
1.4%
IO
22
1.18%
CODM/T6ODM
21
1.13%
H6H
21
1.13%
CYP71
20
1.08%
CHS
19
1.02%
SLS
17
0.91%
CNMT
15
0.81%
CAS
15
0.81%
NCS
14
0.75%
T16H
13
0.7%
CPD/CYP90A1
13
0.7%
7DLH
12
0.65%
FNS
12
0.65%
F3'5'H/CYP75A
12
0.65%
HCT
12
0.65%
COMT
12
0.65%
CYP90D1
12
0.65%
CSE
11
0.59%
LAC
10
0.54%
BBE
9
0.48%
COR
9
0.48%
16OMT
9
0.48%
ANR
9
0.48%
RAS
9
0.48%
BR6OX1/CYP85A1
9
0.48%
CYP719
8
0.43%
G8O/G8H
8
0.43%
8HGO
7
0.38%
PMT
7
0.38%
SGD
7
0.38%
CPR
7
0.38%
AACT
7
0.38%
CCR
6
0.32%
TAT
6
0.32%
SQS/FDFT1
6
0.32%
GGPPS
6
0.32%
LAMT
5
0.27%
TDC
5
0.27%
DWF5
5
0.27%
SQE
5
0.27%
CYP80F1
4
0.22%
CYP80B1
4
0.22%
MPO
4
0.22%
CHI
4
0.22%
DFR
4
0.22%
F5H/CYP84A
4
0.22%
DET2
4
0.22%
MCT/IspD
4
0.22%
GES
3
0.16%
TYDC_DDC
3
0.16%
ROT3/CYP90C1
3
0.16%
MVK
3
0.16%
DXR
3
0.16%
TPS
3
0.16%
HMGR
3
0.16%
FPPS
3
0.16%
MVD
3
0.16%
6OMT_4OMT_SOMT
2
0.11%
FLS
2
0.11%
ANS/LDOX
2
0.11%
CCoAOMT
2
0.11%
CYP51G1
2
0.11%
HYD1
2
0.11%
SMO1/SMO2
2
0.11%
CPI1
2
0.11%
DXS
2
0.11%
HDR/IspH
2
0.11%
MDS/IspF
2
0.11%
HDS/IspG
2
0.11%
ODC
1
0.05%
ISY
1
0.05%
ADC
1
0.05%
HPPR
1
0.05%
FK
1
0.05%
DWF7
1
0.05%
DWF1
1
0.05%
IDI
1
0.05%
CMK/IspE
1
0.05%
HMGS
1
0.05%
PMK
1
0.05%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Candidate Genes | Families | Top family | Results |
|---|---|---|---|---|
| Phenylpropanoid pathway | 160 | 11 | POD (79) | View species results |
| Terpenoid pathway | 151 | 19 | BAHD (65) | View species results |
| Alkaloid pathway | 148 | 20 | NMT (28) | View species results |
| Flavonoid pathway | 85 | 9 | UFGT (26) | View species results |
| Rosmarinic acid pathway | 71 | 7 | C4H (29) | View species results |
| Steroid pathway | 42 | 12 | CAS (13) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Families | Candidate genes | Included families |
|---|---|---|---|
| P450/oxygenase | 24 | 713 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 121 | BAHD, HCT, RAS |
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
| Gene | Pathway | Family | Confidence | Status |
|---|---|---|---|---|
| Lgau2202100218710 | Alkaloid | NMT | medium | pass |
| Lgau2203290223080 | Alkaloid | NMT | low | borderline |
| Lgau2203320223340 | Alkaloid | NMT | low | borderline |
| Lgau2203350223710 | Alkaloid | NMT | medium | pass |
| Lgau2205430229270 | Alkaloid | NMT | low | borderline |
| Lgau2206520234790 | Alkaloid | NMT | medium | pass |
| Lgau2207570238500 | Alkaloid | NMT | medium | pass |
| Lgau2207600238720 | Alkaloid | NMT | medium | pass |
| Lgau2207930240640 | Alkaloid | NMT | medium | borderline |
| Lgau2210630250700 | Alkaloid | NMT | medium | pass |
| Lgau2211620254520 | Alkaloid | NMT | low | borderline |
| Lgau2212120256270 | Alkaloid | NMT | low | borderline |
| Lgau2212920260310 | Alkaloid | NMT | medium | pass |
| Lgau2212920260330 | Alkaloid | NMT | medium | pass |
| Lgau2213230261470 | Alkaloid | NMT | medium | pass |
| Lgau2213280261830 | Alkaloid | NMT | low | borderline |
| Lgau2215370269800 | Alkaloid | NMT | medium | pass |
| Lgau2215940271560 | Alkaloid | NMT | medium | pass |
| Lgau2216640273620 | Alkaloid | NMT | medium | pass |
| Lgau235380281200 | Alkaloid | NMT | low | borderline |
| Lgau1687480041900 | Alkaloid | ODC | medium | pass |
| Lgau1437190015220 | Alkaloid | PMT | low | borderline |
| Lgau1890000052980 | Alkaloid | PMT | low | borderline |
| Lgau2157940127040 | Alkaloid | PMT | medium | pass |
| Lgau2182530166760 | Alkaloid | PMT | low | borderline |
| Lgau2214860268320 | Alkaloid | PMT | medium | borderline |
| Lgau2215400270110 | Alkaloid | PMT | medium | pass |
| Lgau228280281000 | Alkaloid | PMT | low | borderline |
| Lgau1402280005410 | Alkaloid | PYKS | high | pass |
| Lgau1609920027090 | Alkaloid | PYKS | high | pass |
| Lgau1658670037220 | Alkaloid | PYKS | low | borderline |
| Lgau1893900055170 | Alkaloid | PYKS | high | pass |
| Lgau2009510068100 | Alkaloid | PYKS | medium | pass |
| Lgau2085280084950 | Alkaloid | PYKS | low | borderline |
| Lgau2118350094180 | Alkaloid | PYKS | low | borderline |
| Lgau2127960105050 | Alkaloid | PYKS | high | pass |
| Lgau2137060107060 | Alkaloid | PYKS | low | borderline |
| Lgau2139150111810 | Alkaloid | PYKS | medium | pass |
| Lgau2146360120060 | Alkaloid | PYKS | low | borderline |
| Lgau2157120125670 | Alkaloid | PYKS | low | borderline |
| Lgau2167310142030 | Alkaloid | PYKS | low | borderline |
| Lgau2177590159170 | Alkaloid | PYKS | high | pass |
| Lgau2183140169850 | Alkaloid | PYKS | medium | pass |
| Lgau2183140169860 | Alkaloid | PYKS | high | pass |
| Lgau2183340170210 | Alkaloid | PYKS | medium | pass |
| Lgau2187650177410 | Alkaloid | PYKS | high | pass |
| Lgau2189470180230 | Alkaloid | PYKS | high | pass |
| Lgau2191210188220 | Alkaloid | PYKS | low | borderline |
| Lgau2202640221200 | Alkaloid | PYKS | high | pass |
| Lgau2203620224750 | Alkaloid | PYKS | low | borderline |