PlantSME Plant secondary metabolism enzyme database

Leucobryum bowringii (leucobryum_bowringii)

Imported from atlas release summary for Leucobryum bowringii.

998
Candidate Protein Records
694
Pathway-Level Records
1996
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (95)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Phenylpropanoid pathway 184 10 POD (78) View species results
Terpenoid pathway 155 19 BAHD (59) View species results
Alkaloid pathway 141 17 NMT (27) View species results
Flavonoid pathway 88 10 UFGT (25) View species results
Rosmarinic acid pathway 80 7 C4H (38) View species results
Steroid pathway 46 12 CAS (16) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 23 878 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 116 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status
Lbowcontig_40234120 Phenylpropanoid POD medium pass
Lbowcontig_40234730 Phenylpropanoid POD medium pass
Lbowcontig_40234740 Phenylpropanoid POD medium pass
Lbowcontig_40237120 Phenylpropanoid POD low borderline
Lbowcontig_40238160 Phenylpropanoid POD medium pass
Lbowcontig_40240910 Phenylpropanoid POD medium pass
Lbowcontig_40249290 Phenylpropanoid POD medium pass
Lbowcontig_40250500 Phenylpropanoid POD medium pass
Lbowcontig_40250560 Phenylpropanoid POD medium pass
Lbowcontig_40253820 Phenylpropanoid POD low borderline
Lbowcontig_40256700 Phenylpropanoid POD medium pass
Lbowcontig_50266380 Phenylpropanoid POD medium pass
Lbowcontig_50272140 Phenylpropanoid POD medium pass
Lbowcontig_60291240 Phenylpropanoid POD medium pass
Lbowcontig_60294360 Phenylpropanoid POD medium pass
Lbowcontig_60295040 Phenylpropanoid POD medium pass
Lbowcontig_60318920 Phenylpropanoid POD medium pass
Lbowcontig_60321420 Phenylpropanoid POD medium pass
Lbowcontig_60322060 Phenylpropanoid POD medium pass
Lbowcontig_80326340 Phenylpropanoid POD medium pass
Lbowcontig_80326390 Phenylpropanoid POD medium pass
Lbowcontig_80330330 Phenylpropanoid POD medium pass
Lbowcontig_90350970 Phenylpropanoid POD medium pass
Lbowcontig_90353650 Phenylpropanoid POD medium pass
Lbowcontig_90354580 Phenylpropanoid POD medium pass
Lbowcontig_90357220 Phenylpropanoid POD medium pass
Lbowcontig_90358810 Phenylpropanoid POD medium pass
Lbowcontig_90361110 Phenylpropanoid POD medium pass
Lbowcontig_90367470 Phenylpropanoid POD medium pass
Lbowcontig_90368840 Phenylpropanoid POD medium pass
Lbowcontig_100025120 Rosmarinic Acid 4CL low borderline
Lbowcontig_100030800 Rosmarinic Acid 4CL medium pass
Lbowcontig_110045100 Rosmarinic Acid 4CL low borderline
Lbowcontig_120067410 Rosmarinic Acid 4CL medium pass
Lbowcontig_120072830 Rosmarinic Acid 4CL low borderline
Lbowcontig_120076130 Rosmarinic Acid 4CL medium pass
Lbowcontig_120084880 Rosmarinic Acid 4CL low borderline
Lbowcontig_120086070 Rosmarinic Acid 4CL low borderline
Lbowcontig_120087180 Rosmarinic Acid 4CL medium pass
Lbowcontig_150104220 Rosmarinic Acid 4CL low borderline
Lbowcontig_150108100 Rosmarinic Acid 4CL medium pass
Lbowcontig_160122160 Rosmarinic Acid 4CL low borderline
Lbowcontig_160135210 Rosmarinic Acid 4CL low borderline
Lbowcontig_160140790 Rosmarinic Acid 4CL medium pass
Lbowcontig_160144670 Rosmarinic Acid 4CL medium pass
Lbowcontig_160146130 Rosmarinic Acid 4CL low borderline
Lbowcontig_170151310 Rosmarinic Acid 4CL low borderline
Lbowcontig_40233010 Rosmarinic Acid 4CL low borderline
Lbowcontig_40234070 Rosmarinic Acid 4CL medium pass
Lbowcontig_40241430 Rosmarinic Acid 4CL medium pass