PlantSME Plant secondary metabolism enzyme database

Leucobryum bowringii (leucobryum_bowringii)

Imported from atlas release summary for Leucobryum bowringii.

694
Candidate Genes
103
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (95)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Phenylpropanoid pathway 184 10 POD (78) View species results
Terpenoid pathway 155 19 BAHD (59) View species results
Alkaloid pathway 141 17 NMT (27) View species results
Flavonoid pathway 88 10 UFGT (25) View species results
Rosmarinic acid pathway 80 7 C4H (38) View species results
Steroid pathway 46 12 CAS (16) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 878 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 116 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Gene Pathway Family Confidence Status
Lbowcontig_40237890 Alkaloid CODM/T6ODM medium borderline
Lbowcontig_40237920 Alkaloid CODM/T6ODM medium borderline
Lbowcontig_40237930 Alkaloid CODM/T6ODM medium borderline
Lbowcontig_50276580 Alkaloid CODM/T6ODM medium borderline
Lbowcontig_50284780 Alkaloid CODM/T6ODM medium borderline
Lbowcontig_60289240 Alkaloid CODM/T6ODM medium borderline
Lbowcontig_60301980 Alkaloid CODM/T6ODM medium borderline
Lbowcontig_60316660 Alkaloid CODM/T6ODM low borderline
Lbowcontig_80331340 Alkaloid CODM/T6ODM medium borderline
Lbowcontig_80332050 Alkaloid CODM/T6ODM medium borderline
Lbowcontig_80332140 Alkaloid CODM/T6ODM medium borderline
Lbowcontig_80338280 Alkaloid CODM/T6ODM medium borderline
Lbowcontig_10008740 Alkaloid COR medium pass
Lbowcontig_120070430 Alkaloid COR medium pass
Lbowcontig_120092300 Alkaloid COR medium pass
Lbowcontig_220217350 Alkaloid COR medium pass
Lbowcontig_50269620 Alkaloid COR medium pass
Lbowcontig_60323270 Alkaloid COR medium pass
Lbowcontig_60323290 Alkaloid COR medium pass
Lbowcontig_80344400 Alkaloid COR medium pass
Lbowcontig_190156110 Alkaloid CYP719 medium borderline
Lbowcontig_200200780 Alkaloid CYP719 low borderline
Lbowcontig_200200810 Alkaloid CYP719 low borderline
Lbowcontig_220217750 Alkaloid CYP719 medium borderline
Lbowcontig_120077520 Alkaloid CYP80B1 medium borderline
Lbowcontig_160119090 Alkaloid CYP80B1 medium borderline
Lbowcontig_60292950 Alkaloid CYP80B1 medium borderline
Lbowcontig_60312070 Alkaloid CYP80B1 medium borderline
Lbowcontig_60315680 Alkaloid CYP80B1 low borderline
Lbowcontig_60315720 Alkaloid CYP80B1 medium borderline
Lbowcontig_80324850 Alkaloid CYP80B1 medium borderline
Lbowcontig_100019590 Alkaloid G8O/G8H medium borderline
Lbowcontig_120077330 Alkaloid G8O/G8H low borderline
Lbowcontig_160123260 Alkaloid G8O/G8H medium borderline
Lbowcontig_160125640 Alkaloid G8O/G8H medium borderline
Lbowcontig_160134100 Alkaloid G8O/G8H medium borderline
Lbowcontig_200203240 Alkaloid G8O/G8H low borderline
Lbowcontig_200206240 Alkaloid G8O/G8H low borderline
Lbowcontig_40250380 Alkaloid G8O/G8H medium borderline
Lbowcontig_40250400 Alkaloid G8O/G8H medium borderline
Lbowcontig_40250410 Alkaloid G8O/G8H medium borderline
Lbowcontig_50262130 Alkaloid G8O/G8H medium borderline
Lbowcontig_50281860 Alkaloid G8O/G8H medium borderline
Lbowcontig_60305120 Alkaloid G8O/G8H medium borderline
Lbowcontig_60312110 Alkaloid G8O/G8H low borderline
Lbowcontig_60312630 Alkaloid G8O/G8H medium borderline
Lbowcontig_80325890 Alkaloid G8O/G8H low borderline
Lbowcontig_80330810 Alkaloid G8O/G8H low borderline
Lbowcontig_80344650 Alkaloid G8O/G8H medium borderline
Lbowcontig_90347230 Alkaloid G8O/G8H low borderline