Leucobryum bowringii (leucobryum_bowringii)
Imported from atlas release summary for Leucobryum bowringii.
998
Candidate Protein Records
694
Pathway-Level Records
1996
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
- Download candidate protein FASTA for this species
Pathway Coverage
6
Pathways
Family Distribution
1996
Family-Level Calls
C4H
7.52%
C3'H/CYP98A
6.86%
CYP76
5.81%
BAHD
4.71%
4CL
4.56%
POD
4.21%
IFS
4.11%
NMT
3.46%
Other Families
58.77%
More Families (95)
BR6OX2/CYP85A2
59
2.96%
DWF4/CYP90B1
52
2.61%
T3O
51
2.56%
STR
45
2.25%
PAL
45
2.25%
IO
44
2.2%
F3H
43
2.15%
IFR
40
2.0%
F3'H/CYP75B
39
1.95%
CODM/T6ODM
34
1.7%
PYKS
31
1.55%
GS
30
1.5%
UGT
30
1.5%
UFGT
29
1.45%
7DLGT
27
1.35%
SMT1/SMT2/SMT3
24
1.2%
LAC
23
1.15%
COMT
22
1.1%
G8O/G8H
21
1.05%
T16H
21
1.05%
CHS
20
1.0%
F3'5'H/CYP75A
20
1.0%
CAD
19
0.95%
CAS
18
0.9%
TRI/TRII
17
0.85%
CSE
16
0.8%
CYP71
15
0.75%
SGD
14
0.7%
SLS
13
0.65%
16OMT
13
0.65%
FNS
13
0.65%
CNMT
12
0.6%
LAMT
12
0.6%
H6H
12
0.6%
HCT
11
0.55%
RAS
11
0.55%
CPD/CYP90A1
9
0.45%
8HGO
8
0.4%
COR
8
0.4%
NCS
8
0.4%
CYP51G1
8
0.4%
SQS/FDFT1
8
0.4%
AACT
8
0.4%
7DLH
7
0.35%
CYP80B1
7
0.35%
ANR
7
0.35%
DET2
7
0.35%
F5H/CYP84A
6
0.3%
BR6OX1/CYP85A1
6
0.3%
CYP90D1
6
0.3%
BBE
5
0.25%
PMT
5
0.25%
TDC
5
0.25%
CCR
5
0.25%
TAT
5
0.25%
ROT3/CYP90C1
5
0.25%
DWF5
5
0.25%
FPPS
5
0.25%
MVK
5
0.25%
CYP719
4
0.2%
MPO
4
0.2%
DFR
4
0.2%
CHI
4
0.2%
ANS/LDOX
4
0.2%
CPR
4
0.2%
TPS
4
0.2%
GGPPS
4
0.2%
GES
3
0.15%
ISY
3
0.15%
6OMT_4OMT_SOMT
3
0.15%
ADC
3
0.15%
HPPR
3
0.15%
SQE
3
0.15%
CCoAOMT
2
0.1%
SMO1/SMO2
2
0.1%
MCT/IspD
2
0.1%
MVD
2
0.1%
HMGS
2
0.1%
HDS/IspG
2
0.1%
DXS
2
0.1%
TYDC_DDC
1
0.05%
FLS
1
0.05%
HYD1
1
0.05%
DWF1
1
0.05%
FK
1
0.05%
CPI1
1
0.05%
DWF7
1
0.05%
MDS/IspF
1
0.05%
PMK
1
0.05%
DXR
1
0.05%
CMK/IspE
1
0.05%
GPPS
1
0.05%
IDI
1
0.05%
HDR/IspH
1
0.05%
HMGR
1
0.05%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Pathway-Level Records | Detected Families | Top family | Results |
|---|---|---|---|---|
| Phenylpropanoid pathway | 184 | 10 | POD (78) | View species results |
| Terpenoid pathway | 155 | 19 | BAHD (59) | View species results |
| Alkaloid pathway | 141 | 17 | NMT (27) | View species results |
| Flavonoid pathway | 88 | 10 | UFGT (25) | View species results |
| Rosmarinic acid pathway | 80 | 7 | C4H (38) | View species results |
| Steroid pathway | 46 | 12 | CAS (16) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Detected families | Assignment calls | Included families |
|---|---|---|---|
| P450/oxygenase | 23 | 878 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 116 | BAHD, HCT, RAS |
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
| Protein/Isoform Record | Pathway | Family | Confidence | Status |
|---|---|---|---|---|
| Lbowcontig_50262790 | Steroid | DWF5 | medium | pass |
| Lbowcontig_80344830 | Steroid | DWF5 | medium | pass |
| Lbowcontig_60316510 | Steroid | DWF7 | medium | pass |
| Lbowcontig_190155540 | Steroid | FK | high | pass |
| Lbowcontig_110048640 | Steroid | HYD1 | high | pass |
| Lbowcontig_100025220 | Steroid | ROT3/CYP90C1 | low | borderline |
| Lbowcontig_150105530 | Steroid | ROT3/CYP90C1 | medium | borderline |
| Lbowcontig_150105550 | Steroid | ROT3/CYP90C1 | medium | borderline |
| Lbowcontig_160145560 | Steroid | ROT3/CYP90C1 | low | borderline |
| Lbowcontig_60322460 | Steroid | ROT3/CYP90C1 | medium | borderline |
| Lbowcontig_120060400 | Steroid | SMO1/SMO2 | medium | pass |
| Lbowcontig_160130640 | Steroid | SMO1/SMO2 | medium | pass |
| Lbowcontig_100024990 | Steroid | SMT1/SMT2/SMT3 | low | borderline |
| Lbowcontig_100032160 | Steroid | SMT1/SMT2/SMT3 | medium | pass |
| Lbowcontig_10010100 | Steroid | SMT1/SMT2/SMT3 | low | borderline |
| Lbowcontig_120059220 | Steroid | SMT1/SMT2/SMT3 | medium | pass |
| Lbowcontig_120060510 | Steroid | SMT1/SMT2/SMT3 | low | borderline |
| Lbowcontig_140096670 | Steroid | SMT1/SMT2/SMT3 | low | borderline |
| Lbowcontig_140096700 | Steroid | SMT1/SMT2/SMT3 | low | borderline |
| Lbowcontig_140100980 | Steroid | SMT1/SMT2/SMT3 | medium | pass |
| Lbowcontig_150104700 | Steroid | SMT1/SMT2/SMT3 | low | borderline |
| Lbowcontig_150106530 | Steroid | SMT1/SMT2/SMT3 | medium | pass |
| Lbowcontig_150111720 | Steroid | SMT1/SMT2/SMT3 | medium | pass |
| Lbowcontig_160125300 | Steroid | SMT1/SMT2/SMT3 | low | borderline |
| Lbowcontig_160126070 | Steroid | SMT1/SMT2/SMT3 | low | borderline |
| Lbowcontig_160138820 | Steroid | SMT1/SMT2/SMT3 | low | borderline |
| Lbowcontig_170148840 | Steroid | SMT1/SMT2/SMT3 | low | borderline |
| Lbowcontig_190158700 | Steroid | SMT1/SMT2/SMT3 | low | borderline |
| Lbowcontig_200192040 | Steroid | SMT1/SMT2/SMT3 | medium | pass |
| Lbowcontig_200210580 | Steroid | SMT1/SMT2/SMT3 | low | borderline |
| Lbowcontig_40251000 | Steroid | SMT1/SMT2/SMT3 | low | borderline |
| Lbowcontig_40252200 | Steroid | SMT1/SMT2/SMT3 | medium | pass |
| Lbowcontig_40252230 | Steroid | SMT1/SMT2/SMT3 | medium | pass |
| Lbowcontig_60302130 | Steroid | SMT1/SMT2/SMT3 | low | borderline |
| Lbowcontig_60321060 | Steroid | SMT1/SMT2/SMT3 | low | borderline |
| Lbowcontig_90364560 | Steroid | SMT1/SMT2/SMT3 | medium | pass |
| Lbowcontig_120069910 | Steroid | SQE | medium | pass |
| Lbowcontig_120082940 | Steroid | SQE | medium | pass |
| Lbowcontig_80331100 | Steroid | SQE | low | borderline |
| Lbowcontig_10004480 | Steroid | SQS/FDFT1 | high | pass |
| Lbowcontig_200188050 | Steroid | SQS/FDFT1 | high | pass |
| Lbowcontig_200208360 | Steroid | SQS/FDFT1 | low | borderline |
| Lbowcontig_40229220 | Steroid | SQS/FDFT1 | high | pass |
| Lbowcontig_60319140 | Steroid | SQS/FDFT1 | medium | pass |
| Lbowcontig_60319440 | Steroid | SQS/FDFT1 | medium | pass |
| Lbowcontig_80331410 | Steroid | SQS/FDFT1 | high | pass |
| Lbowcontig_90360980 | Steroid | SQS/FDFT1 | low | borderline |
| Lbowcontig_10004770 | Terpenoid | AACT | medium | borderline |
| Lbowcontig_10006530 | Terpenoid | AACT | medium | borderline |
| Lbowcontig_200210920 | Terpenoid | AACT | low | borderline |