PlantSME Plant secondary metabolism enzyme database

Lotus japonicus (lotus_japonicus)

Imported from atlas release summary for Lotus japonicus.

1586
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 442 19 BAHD (174) View species results
Alkaloid pathway 347 19 7DLGT (67) View species results
Phenylpropanoid pathway 322 12 POD (128) View species results
Flavonoid pathway 247 8 UFGT (165) View species results
Rosmarinic acid pathway 136 7 C4H (54) View species results
Steroid pathway 92 13 CAS (37) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1558 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 297 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: TPS
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Gene Pathway Family Confidence Status Best Target
LOTjap01G0011210.1 Terpenoid TPS medium pass TPS__00003__sp_A0A0M4M0T9_TPS28_TRIWF
LOTjap01G0053040.1 Terpenoid TPS medium pass TPS__00003__sp_A0A0M4M0T9_TPS28_TRIWF
LOTjap02G0014080.1 Terpenoid TPS medium pass TPS__00049__sp_A0A4Y5QZ62_T19BL_CANSA
LOTjap03G0001380.1 Terpenoid TPS medium pass TPS__00059__sp_B9RXW0_TPS7_RICCO
LOTjap03G0011150.1 Terpenoid TPS medium pass TPS__00111__sp_G0Y7D2_TPS2_LITCU
LOTjap03G0023520.1 Terpenoid TPS medium pass TPS__00060__sp_B9S9Z3_TPS1_RICCO
LOTjap03G0029830.1 Terpenoid TPS medium pass TPS__00062__sp_B9T536_TPS10_RICCO
LOTjap03G0029930.1 Terpenoid TPS medium pass TPS__00062__sp_B9T536_TPS10_RICCO
LOTjap03G0031280.1 Terpenoid TPS medium pass TPS__00060__sp_B9S9Z3_TPS1_RICCO
LOTjap03G0031520.1 Terpenoid TPS medium pass TPS__00060__sp_B9S9Z3_TPS1_RICCO
LOTjap03G0031530.1 Terpenoid TPS medium pass TPS__00060__sp_B9S9Z3_TPS1_RICCO
LOTjap03G0031540.1 Terpenoid TPS medium pass TPS__00060__sp_B9S9Z3_TPS1_RICCO
LOTjap03G0032500.1 Terpenoid TPS medium pass TPS__00062__sp_B9T536_TPS10_RICCO
LOTjap03G0034510.1 Terpenoid TPS medium pass TPS__00053__sp_A0A7G5KLV3_TPS4_CANOD
LOTjap03G0039800.1 Terpenoid TPS medium pass TPS__00033__sp_A0A2K9RFY0_TPS4_VITAC
LOTjap03G0039810.1 Terpenoid TPS medium pass TPS__00033__sp_A0A2K9RFY0_TPS4_VITAC
LOTjap03G0042570.1 Terpenoid TPS medium pass TPS__00062__sp_B9T536_TPS10_RICCO
LOTjap03G0042970.1 Terpenoid TPS medium pass TPS__00062__sp_B9T536_TPS10_RICCO
LOTjap03G0042980.1 Terpenoid TPS medium pass TPS__00062__sp_B9T536_TPS10_RICCO
LOTjap03G0043380.1 Terpenoid TPS medium pass TPS__00076__sp_D0UZK2_TPS1_CITSI
LOTjap03G0043390.1 Terpenoid TPS medium pass TPS__00076__sp_D0UZK2_TPS1_CITSI
LOTjap03G0043400.1 Terpenoid TPS medium pass TPS__00045__sp_A0A4Y5L9K3_T16CC_CANSA
LOTjap04G0028530.1 Terpenoid TPS medium pass TPS__00062__sp_B9T536_TPS10_RICCO
LOTjap04G0039340.1 Terpenoid TPS medium pass TPS__00049__sp_A0A4Y5QZ62_T19BL_CANSA
LOTjap04G0039590.1 Terpenoid TPS medium pass TPS__00111__sp_G0Y7D2_TPS2_LITCU
LOTjap05G0023580.1 Terpenoid TPS medium pass TPS__00049__sp_A0A4Y5QZ62_T19BL_CANSA
LOTjap06G0031820.1 Terpenoid TPS medium pass TPS__00049__sp_A0A4Y5QZ62_T19BL_CANSA