PlantSME Plant secondary metabolism enzyme database

Lotus japonicus (lotus_japonicus)

Imported from atlas release summary for Lotus japonicus.

1586
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 442 19 BAHD (174) View species results
Alkaloid pathway 347 19 7DLGT (67) View species results
Phenylpropanoid pathway 322 12 POD (128) View species results
Flavonoid pathway 247 8 UFGT (165) View species results
Rosmarinic acid pathway 136 7 C4H (54) View species results
Steroid pathway 92 13 CAS (37) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1558 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 297 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Rosmarinic acid pathway
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Gene Pathway Family Confidence Status
LOTjap01G0004450.1 Rosmarinic Acid 4CL low borderline
LOTjap01G0004470.1 Rosmarinic Acid 4CL low borderline
LOTjap01G0004490.1 Rosmarinic Acid 4CL low borderline
LOTjap01G0016400.1 Rosmarinic Acid 4CL low borderline
LOTjap01G0016410.1 Rosmarinic Acid 4CL low borderline
LOTjap01G0018050.1 Rosmarinic Acid 4CL medium pass
LOTjap01G0050600.1 Rosmarinic Acid 4CL low borderline
LOTjap01G0052460.1 Rosmarinic Acid 4CL medium pass
LOTjap01G0058530.1 Rosmarinic Acid 4CL low borderline
LOTjap02G0007730.1 Rosmarinic Acid 4CL medium pass
LOTjap02G0026190.1 Rosmarinic Acid 4CL medium pass
LOTjap02G0034000.1 Rosmarinic Acid 4CL low borderline
LOTjap02G0034020.1 Rosmarinic Acid 4CL low borderline
LOTjap03G0001790.1 Rosmarinic Acid 4CL medium pass
LOTjap03G0005540.1 Rosmarinic Acid 4CL low borderline
LOTjap03G0008900.1 Rosmarinic Acid 4CL medium pass
LOTjap03G0008910.1 Rosmarinic Acid 4CL medium pass
LOTjap03G0020440.1 Rosmarinic Acid 4CL low borderline
LOTjap03G0022660.1 Rosmarinic Acid 4CL medium pass
LOTjap03G0036740.1 Rosmarinic Acid 4CL medium pass
LOTjap03G0052840.1 Rosmarinic Acid 4CL medium pass
LOTjap04G0003410.1 Rosmarinic Acid 4CL medium pass
LOTjap04G0010010.1 Rosmarinic Acid 4CL low borderline
LOTjap04G0013370.1 Rosmarinic Acid 4CL medium pass
LOTjap04G0016840.1 Rosmarinic Acid 4CL medium pass
LOTjap04G0030490.1 Rosmarinic Acid 4CL medium pass
LOTjap05G0005060.1 Rosmarinic Acid 4CL low borderline
LOTjap05G0010320.1 Rosmarinic Acid 4CL medium pass
LOTjap05G0012490.1 Rosmarinic Acid 4CL low borderline
LOTjap05G0033600.1 Rosmarinic Acid 4CL medium pass
LOTjap06G0006120.1 Rosmarinic Acid 4CL medium pass
LOTjap06G0006130.1 Rosmarinic Acid 4CL medium pass
LOTjap06G0007130.1 Rosmarinic Acid 4CL low borderline
LOTjap06G0008640.1 Rosmarinic Acid 4CL low borderline
LOTjap06G0012480.1 Rosmarinic Acid 4CL medium pass
LOTjap06G0015290.1 Rosmarinic Acid 4CL medium pass
LOTjap06G0022990.1 Rosmarinic Acid 4CL medium pass
LOTjap06G0026610.1 Rosmarinic Acid 4CL low borderline
LOTjapContig001410006060.1 Rosmarinic Acid 4CL medium pass
LOTjapContig001410006070.1 Rosmarinic Acid 4CL medium pass
LOTjapContig001410006080.1 Rosmarinic Acid 4CL medium pass
LOTjapContig002220009400.1 Rosmarinic Acid 4CL medium pass
LOTjapContig00312_ERROPOS8703570012510.1 Rosmarinic Acid 4CL low borderline
LOTjap01G0007550.1 Rosmarinic Acid C4H low borderline
LOTjap01G0012460.1 Rosmarinic Acid C4H medium pass
LOTjap01G0012470.1 Rosmarinic Acid C4H low borderline
LOTjap01G0014400.1 Rosmarinic Acid C4H low borderline
LOTjap01G0014430.1 Rosmarinic Acid C4H medium pass
LOTjap01G0019490.1 Rosmarinic Acid C4H low borderline
LOTjap01G0019500.1 Rosmarinic Acid C4H low borderline