PlantSME Plant secondary metabolism enzyme database

Lotus japonicus (lotus_japonicus)

Imported from atlas release summary for Lotus japonicus.

1869
Candidate Protein Records
1586
Pathway-Level Records
4066
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 442 19 BAHD (174) View species results
Alkaloid pathway 347 19 7DLGT (67) View species results
Phenylpropanoid pathway 322 12 POD (128) View species results
Flavonoid pathway 247 8 UFGT (165) View species results
Rosmarinic acid pathway 136 7 C4H (54) View species results
Steroid pathway 92 13 CAS (37) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 1558 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 297 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Terpenoid pathway
Reset
Protein/Isoform Record Pathway Family Confidence Status
LOTjap03G0005380.1 Terpenoid HDR/IspH high pass
LOTjap04G0040440.1 Terpenoid HDR/IspH low borderline
LOTjap03G0037210.1 Terpenoid HDS/IspG high pass
LOTjap05G0033460.1 Terpenoid HDS/IspG low borderline
LOTjap02G0006540.1 Terpenoid HMGR medium pass
LOTjapContig002470010060.1 Terpenoid HMGR medium pass
LOTjapContig005640020210.1 Terpenoid HMGR medium pass
LOTjap02G0000280.1 Terpenoid HMGS high pass
LOTjap02G0024170.1 Terpenoid HMGS high pass
LOTjap04G0024550.1 Terpenoid HMGS high pass
LOTjap01G0030120.1 Terpenoid IDI medium pass
LOTjap01G0032740.1 Terpenoid IDI low borderline
LOTjap02G0002670.1 Terpenoid IDI low borderline
LOTjap02G0010560.1 Terpenoid MCT/IspD low borderline
LOTjap04G0041770.1 Terpenoid MCT/IspD low borderline
LOTjap04G0043890.1 Terpenoid MCT/IspD high pass
LOTjapContig00312_ERROPOS8703570012980.1 Terpenoid MDS/IspF high pass
LOTjap03G0022130.1 Terpenoid MVD low borderline
LOTjap03G0052590.1 Terpenoid MVD low borderline
LOTjap05G0002060.1 Terpenoid MVD medium pass
LOTjap05G0002110.1 Terpenoid MVD low borderline
LOTjap01G0000660.1 Terpenoid MVK low borderline
LOTjap01G0002780.1 Terpenoid MVK medium pass
LOTjap04G0013790.1 Terpenoid MVK low borderline
LOTjap05G0005840.1 Terpenoid MVK low borderline
LOTjap06G0027690.1 Terpenoid MVK low borderline
LOTjapContig000810003530.1 Terpenoid MVK low borderline
LOTjapContig002720010230.1 Terpenoid MVK low borderline
LOTjap01G0048340.1 Terpenoid PMK medium pass
LOTjap01G0048520.1 Terpenoid PMK medium pass
LOTjap01G0011210.1 Terpenoid TPS medium pass
LOTjap01G0053040.1 Terpenoid TPS medium pass
LOTjap02G0014080.1 Terpenoid TPS medium pass
LOTjap03G0001380.1 Terpenoid TPS medium pass
LOTjap03G0011150.1 Terpenoid TPS medium pass
LOTjap03G0023520.1 Terpenoid TPS medium pass
LOTjap03G0029830.1 Terpenoid TPS medium pass
LOTjap03G0029930.1 Terpenoid TPS medium pass
LOTjap03G0031280.1 Terpenoid TPS medium pass
LOTjap03G0031520.1 Terpenoid TPS medium pass
LOTjap03G0031530.1 Terpenoid TPS medium pass
LOTjap03G0031540.1 Terpenoid TPS medium pass
LOTjap03G0032500.1 Terpenoid TPS medium pass
LOTjap03G0034510.1 Terpenoid TPS medium pass
LOTjap03G0039800.1 Terpenoid TPS medium pass
LOTjap03G0039810.1 Terpenoid TPS medium pass
LOTjap03G0042570.1 Terpenoid TPS medium pass
LOTjap03G0042970.1 Terpenoid TPS medium pass
LOTjap03G0042980.1 Terpenoid TPS medium pass
LOTjap03G0043380.1 Terpenoid TPS medium pass