PlantSME Plant secondary metabolism enzyme database

Lotus japonicus (lotus_japonicus)

Imported from atlas release summary for Lotus japonicus.

1586
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 442 19 BAHD (174) View species results
Alkaloid pathway 347 19 7DLGT (67) View species results
Phenylpropanoid pathway 322 12 POD (128) View species results
Flavonoid pathway 247 8 UFGT (165) View species results
Rosmarinic acid pathway 136 7 C4H (54) View species results
Steroid pathway 92 13 CAS (37) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1558 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 297 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Flavonoid pathway
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Gene Pathway Family Confidence Status
LOTjap02G0017520.1 Flavonoid ANR low borderline
LOTjap03G0002280.1 Flavonoid ANR medium borderline
LOTjap03G0002290.1 Flavonoid ANR medium borderline
LOTjap03G0002300.1 Flavonoid ANR medium borderline
LOTjap03G0002310.1 Flavonoid ANR medium borderline
LOTjap03G0002320.1 Flavonoid ANR medium borderline
LOTjap03G0002330.1 Flavonoid ANR medium borderline
LOTjap03G0002340.1 Flavonoid ANR medium borderline
LOTjap03G0002350.1 Flavonoid ANR medium borderline
LOTjap03G0002360.1 Flavonoid ANR medium borderline
LOTjap03G0014130.1 Flavonoid ANR medium borderline
LOTjap03G0022030.1 Flavonoid ANR medium borderline
LOTjap03G0022040.1 Flavonoid ANR medium borderline
LOTjap03G0023200.1 Flavonoid ANR medium borderline
LOTjap03G0023210.1 Flavonoid ANR medium borderline
LOTjap03G0043430.1 Flavonoid ANR medium borderline
LOTjap04G0039390.1 Flavonoid ANR medium borderline
LOTjap04G0041520.1 Flavonoid ANR low borderline
LOTjap05G0032560.1 Flavonoid ANR medium borderline
LOTjap05G0032570.1 Flavonoid ANR medium borderline
LOTjap05G0032580.1 Flavonoid ANR medium borderline
LOTjap05G0032590.1 Flavonoid ANR medium borderline
LOTjap05G0032600.1 Flavonoid ANR medium borderline
LOTjap06G0011170.1 Flavonoid ANR low borderline
LOTjapContig001410007210.1 Flavonoid ANR medium borderline
LOTjap01G0016300.1 Flavonoid ANS/LDOX low borderline
LOTjap01G0030920.1 Flavonoid ANS/LDOX medium borderline
LOTjap02G0015160.1 Flavonoid ANS/LDOX medium borderline
LOTjap02G0033820.1 Flavonoid ANS/LDOX medium borderline
LOTjap03G0045620.1 Flavonoid ANS/LDOX medium borderline
LOTjap03G0045760.1 Flavonoid ANS/LDOX medium borderline
LOTjap03G0049150.1 Flavonoid ANS/LDOX medium borderline
LOTjap04G0011520.1 Flavonoid ANS/LDOX medium borderline
LOTjap04G0041650.1 Flavonoid ANS/LDOX medium borderline
LOTjap05G0012530.1 Flavonoid ANS/LDOX medium borderline
LOTjap05G0016140.1 Flavonoid ANS/LDOX low borderline
LOTjap05G0028190.1 Flavonoid ANS/LDOX medium borderline
LOTjap06G0009850.1 Flavonoid ANS/LDOX low borderline
LOTjap06G0028300.1 Flavonoid ANS/LDOX medium borderline
LOTjap03G0052720.1 Flavonoid C4H medium borderline
LOTjap03G0052730.1 Flavonoid C4H medium borderline
LOTjap03G0052740.1 Flavonoid C4H medium borderline
LOTjap03G0052750.1 Flavonoid C4H medium borderline
LOTjap05G0003540.1 Flavonoid C4H medium borderline
LOTjap06G0006920.1 Flavonoid C4H medium borderline
LOTjap06G0027170.1 Flavonoid C4H medium borderline
LOTjapContig001410006460.1 Flavonoid C4H medium borderline
LOTjap01G0046310.1 Flavonoid CHI medium pass
LOTjap03G0029340.1 Flavonoid CHI low borderline
LOTjap05G0000640.1 Flavonoid CHI medium pass