Lotus japonicus (lotus_japonicus)
Imported from atlas release summary for Lotus japonicus.
1586
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
6
Pathways
Family Distribution
1586
Candidate Genes
C4H
6.1%
C3'H/CYP98A
6.05%
BAHD
5.12%
UFGT
4.28%
UGT
4.28%
7DLGT
4.18%
T3O
3.79%
CYP76
3.76%
Other Families
62.44%
More Families (96)
IFS
149
3.66%
F3H
138
3.39%
POD
133
3.27%
4CL
129
3.17%
F3'H/CYP75B
87
2.14%
DWF4/CYP90B1
87
2.14%
NMT
86
2.12%
CODM/T6ODM
83
2.04%
BR6OX2/CYP85A2
71
1.75%
STR
66
1.62%
H6H
61
1.5%
CYP71
58
1.43%
CAD
57
1.4%
SMT1/SMT2/SMT3
52
1.28%
CAS
47
1.16%
COMT
46
1.13%
HCT
46
1.13%
CSE
44
1.08%
RAS
43
1.06%
SGD
41
1.01%
CYP90D1
40
0.98%
PYKS
39
0.96%
LAC
39
0.96%
G8O/G8H
35
0.86%
IFR
34
0.84%
PAL
33
0.81%
16OMT
32
0.79%
TRI/TRII
32
0.79%
ANR
32
0.79%
T16H
29
0.71%
F3'5'H/CYP75A
29
0.71%
COR
28
0.69%
GES
27
0.66%
F5H/CYP84A
27
0.66%
TPS
27
0.66%
GS
25
0.61%
CPD/CYP90A1
25
0.61%
PMT
24
0.59%
BR6OX1/CYP85A1
24
0.59%
7DLH
23
0.57%
CCR
22
0.54%
BBE
20
0.49%
LAMT
20
0.49%
CHS
19
0.47%
IO
18
0.44%
NCS
17
0.42%
8HGO
16
0.39%
SLS
16
0.39%
TAT
15
0.37%
ROT3/CYP90C1
15
0.37%
CNMT
14
0.34%
ANS/LDOX
14
0.34%
FNS
12
0.3%
CPR
10
0.25%
CYP51G1
10
0.25%
TDC
9
0.22%
CCoAOMT
9
0.22%
SQE
9
0.22%
MPO
8
0.2%
CYP719
8
0.2%
DFR
8
0.2%
AACT
8
0.2%
CHI
7
0.17%
HPPR
7
0.17%
DET2
7
0.17%
MVK
7
0.17%
DXS
7
0.17%
DWF1
6
0.15%
GGPPS
6
0.15%
SQS/FDFT1
5
0.12%
FPPS
5
0.12%
ISY
4
0.1%
CYP80B1
4
0.1%
MVD
4
0.1%
6OMT_4OMT_SOMT
3
0.07%
TYDC_DDC
3
0.07%
SMO1/SMO2
3
0.07%
IDI
3
0.07%
HMGS
3
0.07%
HMGR
3
0.07%
MCT/IspD
3
0.07%
HDR/IspH
3
0.07%
ADC
2
0.05%
CYP80F1
2
0.05%
DWF5
2
0.05%
CMK/IspE
2
0.05%
PMK
2
0.05%
HDS/IspG
2
0.05%
DXR
2
0.05%
ODC
1
0.02%
XMT_MXMT_DXMT
1
0.02%
CPI1
1
0.02%
HYD1
1
0.02%
DWF7
1
0.02%
FK
1
0.02%
MDS/IspF
1
0.02%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Candidate Genes | Families | Top family | Results |
|---|---|---|---|---|
| Terpenoid pathway | 442 | 19 | BAHD (174) | View species results |
| Alkaloid pathway | 347 | 19 | 7DLGT (67) | View species results |
| Phenylpropanoid pathway | 322 | 12 | POD (128) | View species results |
| Flavonoid pathway | 247 | 8 | UFGT (165) | View species results |
| Rosmarinic acid pathway | 136 | 7 | C4H (54) | View species results |
| Steroid pathway | 92 | 13 | CAS (37) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Families | Candidate genes | Included families |
|---|---|---|---|
| P450/oxygenase | 24 | 1558 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 297 | BAHD, HCT, RAS |
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Terpenoid pathway
| Gene | Pathway | Family | Confidence | Status | Best Target |
|---|---|---|---|---|---|
| LOTjap01G0059210.1 | Terpenoid | BAHD | medium | pass | BAHD__00090__sp_Q9SHJ5_GPAT1_ARATH |
| LOTjap01G0059900.1 | Terpenoid | BAHD | medium | pass | BAHD__00025__sp_O64810_SCP10_ARATH |
| LOTjap01G0060790.1 | Terpenoid | BAHD | medium | pass | BAHD__00047__sp_Q5KS41_WSD11_ARATH |
| LOTjap01G0060800.1 | Terpenoid | BAHD | medium | pass | BAHD__00047__sp_Q5KS41_WSD11_ARATH |
| LOTjap02G0006030.1 | Terpenoid | BAHD | medium | pass | BAHD__00051__sp_Q7XA86_ZDH11_ARATH |
| LOTjap02G0006600.1 | Terpenoid | BAHD | medium | pass | BAHD__00021__sp_K7K424_DAT2D_SOYBN |
| LOTjap02G0007100.1 | Terpenoid | BAHD | medium | pass | BAHD__00012__sp_A1XWY7_CFAT_PETHY |
| LOTjap02G0011940.1 | Terpenoid | BAHD | medium | pass | BAHD__00068__sp_Q9C533_ZDHC1_ARATH |
| LOTjap02G0011950.1 | Terpenoid | BAHD | medium | pass | BAHD__00068__sp_Q9C533_ZDHC1_ARATH |
| LOTjap02G0015270.1 | Terpenoid | BAHD | medium | pass | BAHD__00081__sp_Q9LJB4_5MAT_ARATH |
| LOTjap02G0015280.1 | Terpenoid | BAHD | medium | pass | BAHD__00081__sp_Q9LJB4_5MAT_ARATH |
| LOTjap02G0015410.1 | Terpenoid | BAHD | medium | pass | BAHD__00081__sp_Q9LJB4_5MAT_ARATH |
| LOTjap02G0015420.1 | Terpenoid | BAHD | medium | pass | BAHD__00081__sp_Q9LJB4_5MAT_ARATH |
| LOTjap02G0015430.1 | Terpenoid | BAHD | medium | pass | BAHD__00081__sp_Q9LJB4_5MAT_ARATH |
| LOTjap02G0018850.1 | Terpenoid | BAHD | medium | pass | BAHD__00092__sp_Q9SU91_LPXA_ARATH |
| LOTjap02G0019040.1 | Terpenoid | BAHD | medium | pass | BAHD__00009__sp_A0A4P1QUJ3_TTHAT_LUPAN |
| LOTjap02G0019070.1 | Terpenoid | BAHD | medium | pass | BAHD__00009__sp_A0A4P1QUJ3_TTHAT_LUPAN |
| LOTjap02G0024390.1 | Terpenoid | BAHD | medium | pass | BAHD__00006__sp_A0A2R6Q326_AT16_ACTCC |
| LOTjap02G0026430.1 | Terpenoid | BAHD | medium | pass | BAHD__00073__sp_Q9FF86_DCR_ARATH |
| LOTjap02G0027920.1 | Terpenoid | BAHD | medium | pass | BAHD__00089__sp_Q9SB58_ZDH19_ARATH |
| LOTjap02G0029190.1 | Terpenoid | BAHD | medium | pass | BAHD__00035__sp_Q0WQK2_ZDHC9_ARATH |
| LOTjap02G0031500.1 | Terpenoid | BAHD | low | borderline | BAHD__00066__sp_Q94CK0_WSD7_ARATH |
| LOTjap02G0034550.1 | Terpenoid | BAHD | medium | pass | BAHD__00080__sp_Q9LIH7_ZDHC7_ARATH |
| LOTjap03G0001230.1 | Terpenoid | BAHD | medium | pass | BAHD__00025__sp_O64810_SCP10_ARATH |
| LOTjap03G0001350.1 | Terpenoid | BAHD | medium | pass | BAHD__00093__sp_Q9SV07_ASAT1_ARATH |
| LOTjap03G0002610.1 | Terpenoid | BAHD | medium | pass | BAHD__00056__sp_Q8L5Y5_ZDH17_ARATH |
| LOTjap03G0003000.1 | Terpenoid | BAHD | medium | pass | BAHD__00025__sp_O64810_SCP10_ARATH |
| LOTjap03G0003110.1 | Terpenoid | BAHD | medium | pass | BAHD__00025__sp_O64810_SCP10_ARATH |
| LOTjap03G0005350.1 | Terpenoid | BAHD | medium | pass | BAHD__00058__sp_Q8LG50_LPAT2_ARATH |
| LOTjap03G0008950.1 | Terpenoid | BAHD | low | borderline | BAHD__00055__sp_Q8H780_SCP13_ARATH |
| LOTjap03G0008960.1 | Terpenoid | BAHD | low | borderline | BAHD__00055__sp_Q8H780_SCP13_ARATH |
| LOTjap03G0008970.1 | Terpenoid | BAHD | low | borderline | BAHD__00055__sp_Q8H780_SCP13_ARATH |
| LOTjap03G0008980.1 | Terpenoid | BAHD | low | borderline | BAHD__00026__sp_O64811_SCP9_ARATH |
| LOTjap03G0009240.1 | Terpenoid | BAHD | low | borderline | BAHD__00055__sp_Q8H780_SCP13_ARATH |
| LOTjap03G0009270.1 | Terpenoid | BAHD | low | borderline | BAHD__00055__sp_Q8H780_SCP13_ARATH |
| LOTjap03G0009370.1 | Terpenoid | BAHD | medium | pass | BAHD__00077__sp_Q9FNA9_PDAT1_ARATH |
| LOTjap03G0012160.1 | Terpenoid | BAHD | low | borderline | BAHD__00066__sp_Q94CK0_WSD7_ARATH |
| LOTjap03G0013560.1 | Terpenoid | BAHD | medium | pass | BAHD__00081__sp_Q9LJB4_5MAT_ARATH |
| LOTjap03G0013570.1 | Terpenoid | BAHD | medium | pass | BAHD__00081__sp_Q9LJB4_5MAT_ARATH |
| LOTjap03G0014120.1 | Terpenoid | BAHD | medium | pass | BAHD__00060__sp_Q8VYP5_ZDH14_ARATH |
| LOTjap03G0015440.1 | Terpenoid | BAHD | low | borderline | BAHD__00088__sp_Q9M7Z1_ODB2_ARATH |
| LOTjap03G0015590.1 | Terpenoid | BAHD | medium | pass | BAHD__00077__sp_Q9FNA9_PDAT1_ARATH |
| LOTjap03G0018610.1 | Terpenoid | BAHD | medium | pass | BAHD__00024__sp_O23393_BIA1_ARATH |
| LOTjap03G0018790.1 | Terpenoid | BAHD | medium | pass | BAHD__00083__sp_Q9LMM0_GPAT4_ARATH |
| LOTjap03G0019730.1 | Terpenoid | BAHD | medium | pass | BAHD__00059__sp_Q8S8S2_LPCT2_ARATH |
| LOTjap03G0021360.1 | Terpenoid | BAHD | medium | pass | BAHD__00047__sp_Q5KS41_WSD11_ARATH |
| LOTjap03G0022280.1 | Terpenoid | BAHD | medium | pass | BAHD__00016__sp_D4NUX0_HCT1_ACTRA |
| LOTjap03G0023420.1 | Terpenoid | BAHD | medium | pass | BAHD__00039__sp_Q3ZPN4_ACMAT_VITLA |
| LOTjap03G0027250.1 | Terpenoid | BAHD | medium | pass | BAHD__00094__sp_Q9SYC8_LPAT3_ARATH |
| LOTjap03G0028450.1 | Terpenoid | BAHD | medium | pass | BAHD__00025__sp_O64810_SCP10_ARATH |