PlantSME Plant secondary metabolism enzyme database

Lotus japonicus (lotus_japonicus)

Imported from atlas release summary for Lotus japonicus.

1586
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 442 19 BAHD (174) View species results
Alkaloid pathway 347 19 7DLGT (67) View species results
Phenylpropanoid pathway 322 12 POD (128) View species results
Flavonoid pathway 247 8 UFGT (165) View species results
Rosmarinic acid pathway 136 7 C4H (54) View species results
Steroid pathway 92 13 CAS (37) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1558 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 297 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
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Gene Pathway Family Confidence Status
LOTjap04G0039020.1 Alkaloid BBE medium borderline
LOTjap04G0039030.1 Alkaloid BBE medium borderline
LOTjap04G0039200.1 Alkaloid BBE medium borderline
LOTjap04G0041160.1 Alkaloid BBE medium borderline
LOTjap04G0041170.1 Alkaloid BBE medium borderline
LOTjap04G0041190.1 Alkaloid BBE medium borderline
LOTjap04G0041200.1 Alkaloid BBE medium borderline
LOTjap05G0017240.1 Alkaloid BBE medium borderline
LOTjap05G0017250.1 Alkaloid BBE medium borderline
LOTjap06G0015040.1 Alkaloid BBE medium borderline
LOTjap06G0026720.1 Alkaloid BBE medium borderline
LOTjap06G0026730.1 Alkaloid BBE medium borderline
LOTjap06G0026740.1 Alkaloid BBE medium borderline
LOTjap06G0026760.1 Alkaloid BBE medium borderline
LOTjap06G0027040.1 Alkaloid BBE medium borderline
LOTjap06G0027050.1 Alkaloid BBE medium borderline
LOTjap01G0025180.1 Alkaloid CNMT low borderline
LOTjap01G0040160.1 Alkaloid CNMT medium borderline
LOTjap01G0040170.1 Alkaloid CNMT medium borderline
LOTjap02G0005110.1 Alkaloid CNMT low borderline
LOTjap02G0007470.1 Alkaloid CNMT low borderline
LOTjap02G0009530.1 Alkaloid CNMT low borderline
LOTjap03G0005400.1 Alkaloid CNMT low borderline
LOTjap03G0033110.1 Alkaloid CNMT low borderline
LOTjap03G0045380.1 Alkaloid CNMT low borderline
LOTjap04G0004990.1 Alkaloid CNMT low borderline
LOTjap05G0009870.1 Alkaloid CNMT low borderline
LOTjap05G0020640.1 Alkaloid CNMT medium pass
LOTjap05G0033070.1 Alkaloid CNMT low borderline
LOTjapContig002220009420.1 Alkaloid CNMT low borderline
LOTjap01G0013460.1 Alkaloid CODM/T6ODM medium borderline
LOTjap01G0015650.1 Alkaloid CODM/T6ODM medium borderline
LOTjap01G0020930.1 Alkaloid CODM/T6ODM medium borderline
LOTjap01G0023070.1 Alkaloid CODM/T6ODM low borderline
LOTjap01G0023380.1 Alkaloid CODM/T6ODM medium borderline
LOTjap01G0023390.1 Alkaloid CODM/T6ODM medium borderline
LOTjap01G0030920.1 Alkaloid CODM/T6ODM medium borderline
LOTjap01G0033830.1 Alkaloid CODM/T6ODM medium borderline
LOTjap01G0044860.1 Alkaloid CODM/T6ODM medium borderline
LOTjap01G0048420.1 Alkaloid CODM/T6ODM medium borderline
LOTjap01G0049680.1 Alkaloid CODM/T6ODM medium borderline
LOTjap01G0057870.1 Alkaloid CODM/T6ODM medium borderline
LOTjap01G0058010.1 Alkaloid CODM/T6ODM medium borderline
LOTjap02G0000390.1 Alkaloid CODM/T6ODM medium borderline
LOTjap02G0013050.1 Alkaloid CODM/T6ODM medium borderline
LOTjap02G0013060.1 Alkaloid CODM/T6ODM medium borderline
LOTjap02G0013070.1 Alkaloid CODM/T6ODM medium borderline
LOTjap02G0013080.1 Alkaloid CODM/T6ODM medium borderline
LOTjap02G0013090.1 Alkaloid CODM/T6ODM medium borderline
LOTjap02G0013100.1 Alkaloid CODM/T6ODM medium borderline