Mesembryanthemum crystallinum (mesembryanthemum_crystallinum)

This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.

Pathway Coverage

6 Pathways

Terpenoid pathway 29.78% Alkaloid pathway 23.01% Phenylpropanoid pathway 21.43% Flavonoid pathway 12.06% Rosmarinic acid pathway 7.88% Steroid pathway 5.84%

Family Distribution

1078 Candidate Genes

BAHD 6.24% C4H 5.54% C3'H/CYP98A 5.34% POD 4.33% UGT 3.94% UFGT 3.63% IFS 3.63% 7DLGT 3.59%

Other Families 63.77%

More Families (95)

4CL 84 3.28% CYP76 81 3.16% F3H 74 2.89% T3O 72 2.81% NMT 64 2.5% DWF4/CYP90B1 57 2.22% CODM/T6ODM 46 1.79% TRI/TRII 45 1.76% F3'H/CYP75B 43 1.68% STR 42 1.64% BR6OX2/CYP85A2 39 1.52% HCT 35 1.37% TPS 35 1.37% GES 34 1.33% CAD 34 1.33% SMT1/SMT2/SMT3 34 1.33% H6H 33 1.29% CSE 32 1.25% CYP71 32 1.25% RAS 29 1.13% PYKS 28 1.09% SGD 27 1.05% CAS 26 1.01% IFR 25 0.98% T16H 24 0.94% LAC 24 0.94% G8O/G8H 23 0.9% GS 22 0.86% 7DLH 22 0.86% PMT 22 0.86% BBE 21 0.82% FPPS 20 0.78% ANR 18 0.7% SLS 17 0.66% CNMT 17 0.66% COMT 17 0.66% CYP90D1 17 0.66% COR 15 0.59% CCR 15 0.59% TAT 15 0.59% F3'5'H/CYP75A 13 0.51% CYP51G1 13 0.51% 16OMT 12 0.47% 8HGO 11 0.43% FNS 11 0.43% CPD/CYP90A1 11 0.43% CHS 10 0.39% CCoAOMT 10 0.39% F5H/CYP84A 10 0.39% LAMT 9 0.35% IO 9 0.35% DFR 9 0.35% PAL 9 0.35% BR6OX1/CYP85A1 9 0.35% ROT3/CYP90C1 8 0.31% TYDC_DDC 7 0.27% NCS 7 0.27% CPR 7 0.27% DET2 7 0.27% SQS/FDFT1 7 0.27% HPPR 6 0.23% TDC 5 0.2% MPO 5 0.2% ANS/LDOX 5 0.2% ISY 4 0.16% SQE 4 0.16% FK 4 0.16% GGPPS 4 0.16% AACT 4 0.16% XMT_MXMT_DXMT 3 0.12% CHI 3 0.12% DXS 3 0.12% MVK 3 0.12% MCT/IspD 3 0.12% HMGR 3 0.12% 6OMT_4OMT_SOMT 2 0.08% CYP80B1 2 0.08% FLS 2 0.08% SMO1/SMO2 2 0.08% PMK 2 0.08% MVD 2 0.08% HDR/IspH 2 0.08% ADC 1 0.04% CYP719 1 0.04% DWF7 1 0.04% DWF5 1 0.04% DWF1 1 0.04% HYD1 1 0.04% CPI1 1 0.04% HMGS 1 0.04% MDS/IspF 1 0.04% IDI 1 0.04% CMK/IspE 1 0.04% HDS/IspG 1 0.04% DXR 1 0.04%

Species Pathway Results

The links below show identification results for this species within each pathway, instead of opening the global pathway overview.

Pathway	Candidate Genes	Families	Top family	Results
Terpenoid pathway	321	19	BAHD (124)	View species results
Alkaloid pathway	248	20	7DLGT (40)	View species results
Phenylpropanoid pathway	231	11	POD (92)	View species results
Flavonoid pathway	130	9	UFGT (86)	View species results
Rosmarinic acid pathway	85	7	C4H (27)	View species results
Steroid pathway	63	11	SMT1/SMT2/SMT3 (23)	View species results

Broad Catalytic Groups

P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.

Catalytic group	Families	Candidate genes	Included families
P450/oxygenase	23	875	7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase	3	224	BAHD, HCT, RAS

Identification Result List

Search the public identification results for this species; click pathway or family legends above to narrow within this species.

Current family filter: BBE

Gene	Pathway	Family	Confidence	Status	Best Target
mesembryanthemum_crystallinum_Mc02G00708	Alkaloid	BBE	medium	borderline	BBE__00007__sp_Q9FZC4_FOX1_ARATH
mesembryanthemum_crystallinum_Mc02G00709	Alkaloid	BBE	medium	borderline	BBE__00007__sp_Q9FZC4_FOX1_ARATH
mesembryanthemum_crystallinum_Mc02G00726	Alkaloid	BBE	medium	borderline	BBE__00007__sp_Q9FZC4_FOX1_ARATH
mesembryanthemum_crystallinum_Mc02G00727	Alkaloid	BBE	medium	borderline	BBE__00007__sp_Q9FZC4_FOX1_ARATH
mesembryanthemum_crystallinum_Mc02G00753	Alkaloid	BBE	medium	borderline	BBE__00007__sp_Q9FZC4_FOX1_ARATH
mesembryanthemum_crystallinum_Mc02G01803	Alkaloid	BBE	medium	borderline	BBE__00005__sp_Q93ZA3_BBE13_ARATH
mesembryanthemum_crystallinum_Mc03G02273	Alkaloid	BBE	medium	borderline	BBE__00004__sp_O64743_BBE15_ARATH
mesembryanthemum_crystallinum_Mc04G01277	Alkaloid	BBE	medium	borderline	BBE__00003__sp_F1T161_BBLC1_TOBAC
mesembryanthemum_crystallinum_Mc04G01278	Alkaloid	BBE	medium	borderline	BBE__00001__sp_A7WPL6_BBLB_TOBAC
mesembryanthemum_crystallinum_Mc04G02659	Alkaloid	BBE	medium	borderline	BBE__00001__sp_A7WPL6_BBLB_TOBAC
mesembryanthemum_crystallinum_Mc04G02660	Alkaloid	BBE	medium	borderline	BBE__00003__sp_F1T161_BBLC1_TOBAC
mesembryanthemum_crystallinum_Mc05G01385	Alkaloid	BBE	medium	borderline	BBE__00005__sp_Q93ZA3_BBE13_ARATH
mesembryanthemum_crystallinum_Mc05G02608	Alkaloid	BBE	medium	borderline	BBE__00001__sp_A7WPL6_BBLB_TOBAC
mesembryanthemum_crystallinum_Mc07G00993	Alkaloid	BBE	medium	borderline	BBE__00005__sp_Q93ZA3_BBE13_ARATH
mesembryanthemum_crystallinum_Mc08G00099	Alkaloid	BBE	medium	borderline	BBE__00004__sp_O64743_BBE15_ARATH
mesembryanthemum_crystallinum_Mc09G00121	Alkaloid	BBE	medium	borderline	BBE__00005__sp_Q93ZA3_BBE13_ARATH
mesembryanthemum_crystallinum_Mc09G00716	Alkaloid	BBE	medium	borderline	BBE__00005__sp_Q93ZA3_BBE13_ARATH
mesembryanthemum_crystallinum_Mc09G00717	Alkaloid	BBE	medium	borderline	BBE__00004__sp_O64743_BBE15_ARATH
mesembryanthemum_crystallinum_Mc09G01737	Alkaloid	BBE	medium	borderline	BBE__00005__sp_Q93ZA3_BBE13_ARATH
mesembryanthemum_crystallinum_Mc09G01738	Alkaloid	BBE	medium	borderline	BBE__00007__sp_Q9FZC4_FOX1_ARATH
mesembryanthemum_crystallinum_Mc09G01740	Alkaloid	BBE	medium	borderline	BBE__00005__sp_Q93ZA3_BBE13_ARATH