Mesembryanthemum crystallinum (mesembryanthemum_crystallinum)
/
Imported from atlas release summary for Mesembryanthemum crystallinum.
1078
Candidate Genes
103
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Common name
/
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
6
Pathways
Family Distribution
1078
Candidate Genes
BAHD
6.24%
C4H
5.54%
C3'H/CYP98A
5.34%
POD
4.33%
UGT
3.94%
UFGT
3.63%
IFS
3.63%
7DLGT
3.59%
Other Families
63.77%
More Families (95)
4CL
84
3.28%
CYP76
81
3.16%
F3H
74
2.89%
T3O
72
2.81%
NMT
64
2.5%
DWF4/CYP90B1
57
2.22%
CODM/T6ODM
46
1.79%
TRI/TRII
45
1.76%
F3'H/CYP75B
43
1.68%
STR
42
1.64%
BR6OX2/CYP85A2
39
1.52%
HCT
35
1.37%
TPS
35
1.37%
GES
34
1.33%
CAD
34
1.33%
SMT1/SMT2/SMT3
34
1.33%
H6H
33
1.29%
CSE
32
1.25%
CYP71
32
1.25%
RAS
29
1.13%
PYKS
28
1.09%
SGD
27
1.05%
CAS
26
1.01%
IFR
25
0.98%
T16H
24
0.94%
LAC
24
0.94%
G8O/G8H
23
0.9%
GS
22
0.86%
7DLH
22
0.86%
PMT
22
0.86%
BBE
21
0.82%
FPPS
20
0.78%
ANR
18
0.7%
SLS
17
0.66%
CNMT
17
0.66%
COMT
17
0.66%
CYP90D1
17
0.66%
COR
15
0.59%
CCR
15
0.59%
TAT
15
0.59%
F3'5'H/CYP75A
13
0.51%
CYP51G1
13
0.51%
16OMT
12
0.47%
8HGO
11
0.43%
FNS
11
0.43%
CPD/CYP90A1
11
0.43%
CHS
10
0.39%
CCoAOMT
10
0.39%
F5H/CYP84A
10
0.39%
LAMT
9
0.35%
IO
9
0.35%
DFR
9
0.35%
PAL
9
0.35%
BR6OX1/CYP85A1
9
0.35%
ROT3/CYP90C1
8
0.31%
TYDC_DDC
7
0.27%
NCS
7
0.27%
CPR
7
0.27%
DET2
7
0.27%
SQS/FDFT1
7
0.27%
HPPR
6
0.23%
TDC
5
0.2%
MPO
5
0.2%
ANS/LDOX
5
0.2%
ISY
4
0.16%
SQE
4
0.16%
FK
4
0.16%
GGPPS
4
0.16%
AACT
4
0.16%
XMT_MXMT_DXMT
3
0.12%
CHI
3
0.12%
DXS
3
0.12%
MVK
3
0.12%
MCT/IspD
3
0.12%
HMGR
3
0.12%
6OMT_4OMT_SOMT
2
0.08%
CYP80B1
2
0.08%
FLS
2
0.08%
SMO1/SMO2
2
0.08%
PMK
2
0.08%
MVD
2
0.08%
HDR/IspH
2
0.08%
ADC
1
0.04%
CYP719
1
0.04%
DWF7
1
0.04%
DWF5
1
0.04%
DWF1
1
0.04%
HYD1
1
0.04%
CPI1
1
0.04%
HMGS
1
0.04%
MDS/IspF
1
0.04%
IDI
1
0.04%
CMK/IspE
1
0.04%
HDS/IspG
1
0.04%
DXR
1
0.04%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Candidate Genes | Families | Top family | Results |
|---|---|---|---|---|
| Terpenoid pathway | 321 | 19 | BAHD (124) | View species results |
| Alkaloid pathway | 248 | 20 | 7DLGT (40) | View species results |
| Phenylpropanoid pathway | 231 | 11 | POD (92) | View species results |
| Flavonoid pathway | 130 | 9 | UFGT (86) | View species results |
| Rosmarinic acid pathway | 85 | 7 | C4H (27) | View species results |
| Steroid pathway | 63 | 11 | SMT1/SMT2/SMT3 (23) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Families | Candidate genes | Included families |
|---|---|---|---|
| P450/oxygenase | 23 | 875 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 224 | BAHD, HCT, RAS |
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: TPS
| Gene | Pathway | Family | Confidence | Status | Best Target |
|---|---|---|---|---|---|
| mesembryanthemum_crystallinum_Mc01G01723 | Terpenoid | TPS | medium | pass | TPS__00060__sp_B9S9Z3_TPS1_RICCO |
| mesembryanthemum_crystallinum_Mc02G02077 | Terpenoid | TPS | medium | pass | TPS__00062__sp_B9T536_TPS10_RICCO |
| mesembryanthemum_crystallinum_Mc03G00936 | Terpenoid | TPS | medium | pass | TPS__00128__sp_J7LMP2_TPS5_PHYDL |
| mesembryanthemum_crystallinum_Mc04G02261 | Terpenoid | TPS | medium | pass | TPS__00131__sp_J9QS23_TPS9_SELML |
| mesembryanthemum_crystallinum_Mc04G02559 | Terpenoid | TPS | medium | pass | TPS__00049__sp_A0A4Y5QZ62_T19BL_CANSA |
| mesembryanthemum_crystallinum_Mc06G01142 | Terpenoid | TPS | medium | pass | TPS__00008__sp_A0A167V661_TPS8_CAMSI |
| mesembryanthemum_crystallinum_Mc07G01508 | Terpenoid | TPS | medium | pass | TPS__00060__sp_B9S9Z3_TPS1_RICCO |
| mesembryanthemum_crystallinum_Mc07G01612 | Terpenoid | TPS | medium | pass | TPS__00045__sp_A0A4Y5L9K3_T16CC_CANSA |
| mesembryanthemum_crystallinum_Mc07G01614 | Terpenoid | TPS | medium | pass | TPS__00046__sp_A0A4Y5QVX6_T20CT_CANSA |
| mesembryanthemum_crystallinum_Mc07G01615 | Terpenoid | TPS | low | borderline | TPS__00127__sp_J7LJN5_TPS6_PHYDL |
| mesembryanthemum_crystallinum_Mc07G01617 | Terpenoid | TPS | medium | pass | TPS__00045__sp_A0A4Y5L9K3_T16CC_CANSA |
| mesembryanthemum_crystallinum_Mc07G01626 | Terpenoid | TPS | medium | pass | TPS__00060__sp_B9S9Z3_TPS1_RICCO |
| mesembryanthemum_crystallinum_Mc07G01627 | Terpenoid | TPS | medium | pass | TPS__00060__sp_B9S9Z3_TPS1_RICCO |
| mesembryanthemum_crystallinum_Mc07G01628 | Terpenoid | TPS | medium | pass | TPS__00060__sp_B9S9Z3_TPS1_RICCO |
| mesembryanthemum_crystallinum_Mc07G01630 | Terpenoid | TPS | medium | pass | TPS__00076__sp_D0UZK2_TPS1_CITSI |
| mesembryanthemum_crystallinum_Mc07G01631 | Terpenoid | TPS | medium | pass | TPS__00076__sp_D0UZK2_TPS1_CITSI |
| mesembryanthemum_crystallinum_Mc07G01632 | Terpenoid | TPS | medium | pass | TPS__00045__sp_A0A4Y5L9K3_T16CC_CANSA |
| mesembryanthemum_crystallinum_Mc07G01633 | Terpenoid | TPS | medium | pass | TPS__00076__sp_D0UZK2_TPS1_CITSI |
| mesembryanthemum_crystallinum_Mc07G01650 | Terpenoid | TPS | medium | pass | TPS__00045__sp_A0A4Y5L9K3_T16CC_CANSA |
| mesembryanthemum_crystallinum_Mc07G01653 | Terpenoid | TPS | medium | pass | TPS__00076__sp_D0UZK2_TPS1_CITSI |
| mesembryanthemum_crystallinum_Mc07G01655 | Terpenoid | TPS | medium | pass | TPS__00018__sp_A0A1V0QSF3_TS8FN_CANSA |
| mesembryanthemum_crystallinum_Mc07G01659 | Terpenoid | TPS | medium | pass | TPS__00018__sp_A0A1V0QSF3_TS8FN_CANSA |
| mesembryanthemum_crystallinum_Mc07G01661 | Terpenoid | TPS | medium | pass | TPS__00076__sp_D0UZK2_TPS1_CITSI |
| mesembryanthemum_crystallinum_Mc07G01663 | Terpenoid | TPS | medium | pass | TPS__00076__sp_D0UZK2_TPS1_CITSI |
| mesembryanthemum_crystallinum_Mc08G00232 | Terpenoid | TPS | medium | pass | TPS__00033__sp_A0A2K9RFY0_TPS4_VITAC |
| mesembryanthemum_crystallinum_Mc08G01008 | Terpenoid | TPS | medium | pass | TPS__00062__sp_B9T536_TPS10_RICCO |
| mesembryanthemum_crystallinum_Mc08G01628 | Terpenoid | TPS | medium | pass | TPS__00060__sp_B9S9Z3_TPS1_RICCO |
| mesembryanthemum_crystallinum_Mc08G01630 | Terpenoid | TPS | medium | pass | TPS__00076__sp_D0UZK2_TPS1_CITSI |
| mesembryanthemum_crystallinum_Mc09G01705 | Terpenoid | TPS | medium | pass | TPS__00003__sp_A0A0M4M0T9_TPS28_TRIWF |
| mesembryanthemum_crystallinum_Mc09G02019 | Terpenoid | TPS | medium | pass | TPS__00003__sp_A0A0M4M0T9_TPS28_TRIWF |
| mesembryanthemum_crystallinum_Mc09G02023 | Terpenoid | TPS | medium | pass | TPS__00008__sp_A0A167V661_TPS8_CAMSI |
| mesembryanthemum_crystallinum_Mc09G02024 | Terpenoid | TPS | medium | pass | TPS__00008__sp_A0A167V661_TPS8_CAMSI |
| mesembryanthemum_crystallinum_Mc09G02025 | Terpenoid | TPS | medium | pass | TPS__00005__sp_A0A140KFG9_TPS1_CAMBE |
| mesembryanthemum_crystallinum_Mc09G02026 | Terpenoid | TPS | medium | pass | TPS__00060__sp_B9S9Z3_TPS1_RICCO |
| mesembryanthemum_crystallinum_Mc09G02028 | Terpenoid | TPS | medium | pass | TPS__00008__sp_A0A167V661_TPS8_CAMSI |