Mesembryanthemum crystallinum (mesembryanthemum_crystallinum)
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Imported from atlas release summary for Mesembryanthemum crystallinum.
1078
Candidate Genes
103
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Common name
/
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
6
Pathways
Family Distribution
1078
Candidate Genes
BAHD
6.24%
C4H
5.54%
C3'H/CYP98A
5.34%
POD
4.33%
UGT
3.94%
UFGT
3.63%
IFS
3.63%
7DLGT
3.59%
Other Families
63.77%
More Families (95)
4CL
84
3.28%
CYP76
81
3.16%
F3H
74
2.89%
T3O
72
2.81%
NMT
64
2.5%
DWF4/CYP90B1
57
2.22%
CODM/T6ODM
46
1.79%
TRI/TRII
45
1.76%
F3'H/CYP75B
43
1.68%
STR
42
1.64%
BR6OX2/CYP85A2
39
1.52%
HCT
35
1.37%
TPS
35
1.37%
GES
34
1.33%
CAD
34
1.33%
SMT1/SMT2/SMT3
34
1.33%
H6H
33
1.29%
CSE
32
1.25%
CYP71
32
1.25%
RAS
29
1.13%
PYKS
28
1.09%
SGD
27
1.05%
CAS
26
1.01%
IFR
25
0.98%
T16H
24
0.94%
LAC
24
0.94%
G8O/G8H
23
0.9%
GS
22
0.86%
7DLH
22
0.86%
PMT
22
0.86%
BBE
21
0.82%
FPPS
20
0.78%
ANR
18
0.7%
SLS
17
0.66%
CNMT
17
0.66%
COMT
17
0.66%
CYP90D1
17
0.66%
COR
15
0.59%
CCR
15
0.59%
TAT
15
0.59%
F3'5'H/CYP75A
13
0.51%
CYP51G1
13
0.51%
16OMT
12
0.47%
8HGO
11
0.43%
FNS
11
0.43%
CPD/CYP90A1
11
0.43%
CHS
10
0.39%
CCoAOMT
10
0.39%
F5H/CYP84A
10
0.39%
LAMT
9
0.35%
IO
9
0.35%
DFR
9
0.35%
PAL
9
0.35%
BR6OX1/CYP85A1
9
0.35%
ROT3/CYP90C1
8
0.31%
TYDC_DDC
7
0.27%
NCS
7
0.27%
CPR
7
0.27%
DET2
7
0.27%
SQS/FDFT1
7
0.27%
HPPR
6
0.23%
TDC
5
0.2%
MPO
5
0.2%
ANS/LDOX
5
0.2%
ISY
4
0.16%
SQE
4
0.16%
FK
4
0.16%
GGPPS
4
0.16%
AACT
4
0.16%
XMT_MXMT_DXMT
3
0.12%
CHI
3
0.12%
DXS
3
0.12%
MVK
3
0.12%
MCT/IspD
3
0.12%
HMGR
3
0.12%
6OMT_4OMT_SOMT
2
0.08%
CYP80B1
2
0.08%
FLS
2
0.08%
SMO1/SMO2
2
0.08%
PMK
2
0.08%
MVD
2
0.08%
HDR/IspH
2
0.08%
ADC
1
0.04%
CYP719
1
0.04%
DWF7
1
0.04%
DWF5
1
0.04%
DWF1
1
0.04%
HYD1
1
0.04%
CPI1
1
0.04%
HMGS
1
0.04%
MDS/IspF
1
0.04%
IDI
1
0.04%
CMK/IspE
1
0.04%
HDS/IspG
1
0.04%
DXR
1
0.04%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Candidate Genes | Families | Top family | Results |
|---|---|---|---|---|
| Terpenoid pathway | 321 | 19 | BAHD (124) | View species results |
| Alkaloid pathway | 248 | 20 | 7DLGT (40) | View species results |
| Phenylpropanoid pathway | 231 | 11 | POD (92) | View species results |
| Flavonoid pathway | 130 | 9 | UFGT (86) | View species results |
| Rosmarinic acid pathway | 85 | 7 | C4H (27) | View species results |
| Steroid pathway | 63 | 11 | SMT1/SMT2/SMT3 (23) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Families | Candidate genes | Included families |
|---|---|---|---|
| P450/oxygenase | 23 | 875 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 224 | BAHD, HCT, RAS |
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Terpenoid pathway
| Gene | Pathway | Family | Confidence | Status | Best Target |
|---|---|---|---|---|---|
| mesembryanthemum_crystallinum_Mc06G02022 | Terpenoid | BAHD | medium | pass | BAHD__00058__sp_Q8LG50_LPAT2_ARATH |
| mesembryanthemum_crystallinum_Mc06G02139 | Terpenoid | BAHD | medium | pass | BAHD__00049__sp_Q5PNZ1_ZDH21_ARATH |
| mesembryanthemum_crystallinum_Mc06G02140 | Terpenoid | BAHD | medium | pass | BAHD__00085__sp_Q9M1K5_ZDH13_ARATH |
| mesembryanthemum_crystallinum_Mc06G02254 | Terpenoid | BAHD | low | borderline | BAHD__00016__sp_D4NUX0_HCT1_ACTRA |
| mesembryanthemum_crystallinum_Mc07G00017 | Terpenoid | BAHD | medium | pass | BAHD__00081__sp_Q9LJB4_5MAT_ARATH |
| mesembryanthemum_crystallinum_Mc07G00028 | Terpenoid | BAHD | medium | pass | BAHD__00051__sp_Q7XA86_ZDH11_ARATH |
| mesembryanthemum_crystallinum_Mc07G00120 | Terpenoid | BAHD | medium | pass | BAHD__00067__sp_Q9ASU1_DGAT2_ARATH |
| mesembryanthemum_crystallinum_Mc07G00129 | Terpenoid | BAHD | medium | pass | BAHD__00097__sp_Q9ZV87_NAPES_ARATH |
| mesembryanthemum_crystallinum_Mc07G00186 | Terpenoid | BAHD | medium | pass | BAHD__00089__sp_Q9SB58_ZDH19_ARATH |
| mesembryanthemum_crystallinum_Mc07G00232 | Terpenoid | BAHD | medium | pass | BAHD__00095__sp_Q9SZ58_BRAT1_ARATH |
| mesembryanthemum_crystallinum_Mc07G00424 | Terpenoid | BAHD | medium | pass | BAHD__00016__sp_D4NUX0_HCT1_ACTRA |
| mesembryanthemum_crystallinum_Mc07G00640 | Terpenoid | BAHD | medium | pass | BAHD__00016__sp_D4NUX0_HCT1_ACTRA |
| mesembryanthemum_crystallinum_Mc07G00660 | Terpenoid | BAHD | low | borderline | BAHD__00025__sp_O64810_SCP10_ARATH |
| mesembryanthemum_crystallinum_Mc07G00661 | Terpenoid | BAHD | low | borderline | BAHD__00026__sp_O64811_SCP9_ARATH |
| mesembryanthemum_crystallinum_Mc07G00730 | Terpenoid | BAHD | medium | pass | BAHD__00016__sp_D4NUX0_HCT1_ACTRA |
| mesembryanthemum_crystallinum_Mc07G00731 | Terpenoid | BAHD | medium | pass | BAHD__00016__sp_D4NUX0_HCT1_ACTRA |
| mesembryanthemum_crystallinum_Mc07G00733 | Terpenoid | BAHD | medium | pass | BAHD__00016__sp_D4NUX0_HCT1_ACTRA |
| mesembryanthemum_crystallinum_Mc07G00735 | Terpenoid | BAHD | medium | pass | BAHD__00016__sp_D4NUX0_HCT1_ACTRA |
| mesembryanthemum_crystallinum_Mc07G01537 | Terpenoid | BAHD | low | borderline | BAHD__00066__sp_Q94CK0_WSD7_ARATH |
| mesembryanthemum_crystallinum_Mc07G01816 | Terpenoid | BAHD | low | borderline | BAHD__00082__sp_Q9LLY4_LPAT1_BRANA |
| mesembryanthemum_crystallinum_Mc07G01876 | Terpenoid | BAHD | low | borderline | BAHD__00088__sp_Q9M7Z1_ODB2_ARATH |
| mesembryanthemum_crystallinum_Mc07G01969 | Terpenoid | BAHD | medium | pass | BAHD__00096__sp_Q9XGY6_WAXS1_SIMCH |
| mesembryanthemum_crystallinum_Mc07G01970 | Terpenoid | BAHD | medium | pass | BAHD__00096__sp_Q9XGY6_WAXS1_SIMCH |
| mesembryanthemum_crystallinum_Mc08G00127 | Terpenoid | BAHD | medium | pass | BAHD__00010__sp_A0AAW1LG41_BAHD1_SAPOF |
| mesembryanthemum_crystallinum_Mc08G00245 | Terpenoid | BAHD | low | borderline | BAHD__00047__sp_Q5KS41_WSD11_ARATH |
| mesembryanthemum_crystallinum_Mc08G00247 | Terpenoid | BAHD | low | borderline | BAHD__00047__sp_Q5KS41_WSD11_ARATH |
| mesembryanthemum_crystallinum_Mc08G00248 | Terpenoid | BAHD | medium | pass | BAHD__00087__sp_Q9M3B1_WSD6_ARATH |
| mesembryanthemum_crystallinum_Mc08G00249 | Terpenoid | BAHD | medium | pass | BAHD__00087__sp_Q9M3B1_WSD6_ARATH |
| mesembryanthemum_crystallinum_Mc08G00250 | Terpenoid | BAHD | medium | pass | BAHD__00047__sp_Q5KS41_WSD11_ARATH |
| mesembryanthemum_crystallinum_Mc08G00251 | Terpenoid | BAHD | low | borderline | BAHD__00047__sp_Q5KS41_WSD11_ARATH |
| mesembryanthemum_crystallinum_Mc08G00252 | Terpenoid | BAHD | low | borderline | BAHD__00087__sp_Q9M3B1_WSD6_ARATH |
| mesembryanthemum_crystallinum_Mc08G00253 | Terpenoid | BAHD | low | borderline | BAHD__00087__sp_Q9M3B1_WSD6_ARATH |
| mesembryanthemum_crystallinum_Mc08G00345 | Terpenoid | BAHD | low | borderline | BAHD__00008__sp_A0A2Z5CVQ4_AT1_CROXC |
| mesembryanthemum_crystallinum_Mc08G00359 | Terpenoid | BAHD | medium | pass | BAHD__00039__sp_Q3ZPN4_ACMAT_VITLA |
| mesembryanthemum_crystallinum_Mc08G00505 | Terpenoid | BAHD | medium | pass | BAHD__00058__sp_Q8LG50_LPAT2_ARATH |
| mesembryanthemum_crystallinum_Mc08G00507 | Terpenoid | BAHD | medium | pass | BAHD__00058__sp_Q8LG50_LPAT2_ARATH |
| mesembryanthemum_crystallinum_Mc08G00634 | Terpenoid | BAHD | medium | pass | BAHD__00052__sp_Q8GWG0_GPAT9_ARATH |
| mesembryanthemum_crystallinum_Mc08G00738 | Terpenoid | BAHD | medium | pass | BAHD__00038__sp_Q3EC11_ZDHC2_ARATH |
| mesembryanthemum_crystallinum_Mc08G00782 | Terpenoid | BAHD | medium | pass | BAHD__00055__sp_Q8H780_SCP13_ARATH |
| mesembryanthemum_crystallinum_Mc08G01129 | Terpenoid | BAHD | low | borderline | BAHD__00066__sp_Q94CK0_WSD7_ARATH |
| mesembryanthemum_crystallinum_Mc08G01227 | Terpenoid | BAHD | medium | pass | BAHD__00077__sp_Q9FNA9_PDAT1_ARATH |
| mesembryanthemum_crystallinum_Mc08G01265 | Terpenoid | BAHD | low | borderline | BAHD__00055__sp_Q8H780_SCP13_ARATH |
| mesembryanthemum_crystallinum_Mc08G01460 | Terpenoid | BAHD | low | borderline | BAHD__00087__sp_Q9M3B1_WSD6_ARATH |
| mesembryanthemum_crystallinum_Mc08G01462 | Terpenoid | BAHD | low | borderline | BAHD__00087__sp_Q9M3B1_WSD6_ARATH |
| mesembryanthemum_crystallinum_Mc08G01464 | Terpenoid | BAHD | low | borderline | BAHD__00066__sp_Q94CK0_WSD7_ARATH |
| mesembryanthemum_crystallinum_Mc08G01469 | Terpenoid | BAHD | medium | pass | BAHD__00039__sp_Q3ZPN4_ACMAT_VITLA |
| mesembryanthemum_crystallinum_Mc08G01470 | Terpenoid | BAHD | medium | pass | BAHD__00039__sp_Q3ZPN4_ACMAT_VITLA |
| mesembryanthemum_crystallinum_Mc08G01639 | Terpenoid | BAHD | medium | pass | BAHD__00006__sp_A0A2R6Q326_AT16_ACTCC |
| mesembryanthemum_crystallinum_Mc08G01648 | Terpenoid | BAHD | medium | pass | BAHD__00006__sp_A0A2R6Q326_AT16_ACTCC |
| mesembryanthemum_crystallinum_Mc08G01652 | Terpenoid | BAHD | medium | pass | BAHD__00039__sp_Q3ZPN4_ACMAT_VITLA |