PlantSME Plant secondary metabolism enzyme database

Metzgeria hamata (metzgeria_hamata)

Imported from atlas release summary for Metzgeria hamata.

585
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Phenylpropanoid pathway 161 11 POD (96) View species results
Terpenoid pathway 144 21 BAHD (59) View species results
Alkaloid pathway 126 18 TRI/TRII (26) View species results
Flavonoid pathway 65 9 UFGT (28) View species results
Rosmarinic acid pathway 55 7 C4H (31) View species results
Steroid pathway 34 11 SMT1/SMT2/SMT3 (12) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 592 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 152 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Rosmarinic acid pathway
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Gene Pathway Family Confidence Status
Mhamcontig_1780113110 Rosmarinic Acid C4H low borderline
Mhamcontig_1780113730 Rosmarinic Acid C4H low borderline
Mhamcontig_1780113900 Rosmarinic Acid C4H low borderline
Mhamcontig_1800114640 Rosmarinic Acid C4H low borderline
Mhamcontig_1820118140 Rosmarinic Acid C4H medium pass
Mhamcontig_1820118190 Rosmarinic Acid C4H low borderline
Mhamcontig_1820118210 Rosmarinic Acid C4H low borderline
Mhamcontig_1850124360 Rosmarinic Acid C4H medium pass
Mhamcontig_1850124630 Rosmarinic Acid C4H low borderline
Mhamcontig_1910133090 Rosmarinic Acid C4H medium pass
Mhamcontig_1910133100 Rosmarinic Acid C4H low borderline
Mhamcontig_1910133560 Rosmarinic Acid C4H medium pass
Mhamcontig_1910133590 Rosmarinic Acid C4H low borderline
Mhamcontig_1910133600 Rosmarinic Acid C4H medium pass
Mhamcontig_1910133610 Rosmarinic Acid C4H medium pass
Mhamcontig_1910133620 Rosmarinic Acid C4H medium pass
Mhamcontig_1910133650 Rosmarinic Acid C4H medium pass
Mhamcontig_1910133660 Rosmarinic Acid C4H medium pass
Mhamcontig_1910133670 Rosmarinic Acid C4H medium pass
Mhamcontig_1980139950 Rosmarinic Acid C4H medium pass
Mhamcontig_2000143570 Rosmarinic Acid C4H low borderline
Mhamcontig_2070150080 Rosmarinic Acid C4H medium pass
Mhamcontig_2070150670 Rosmarinic Acid C4H low borderline
Mhamcontig_2110152170 Rosmarinic Acid C4H low borderline
Mhamcontig_2250166860 Rosmarinic Acid C4H medium pass
Mhamcontig_2300172670 Rosmarinic Acid C4H low borderline
Mhamcontig_2300172980 Rosmarinic Acid C4H low borderline
Mhamcontig_2300173020 Rosmarinic Acid C4H medium pass
Mhamcontig_2330174780 Rosmarinic Acid C4H medium pass
Mhamcontig_2340182420 Rosmarinic Acid C4H low borderline
Mhamcontig_2440193250 Rosmarinic Acid C4H medium pass
Mhamcontig_2450194190 Rosmarinic Acid C4H low borderline
Mhamcontig_260198350 Rosmarinic Acid C4H low borderline
Mhamcontig_280203870 Rosmarinic Acid C4H low borderline
Mhamcontig_290204120 Rosmarinic Acid C4H low borderline
Mhamcontig_320206540 Rosmarinic Acid C4H low borderline
Mhamcontig_420214790 Rosmarinic Acid C4H low borderline
Mhamcontig_420214870 Rosmarinic Acid C4H low borderline
Mhamcontig_420216890 Rosmarinic Acid C4H low borderline
Mhamcontig_430218680 Rosmarinic Acid C4H medium pass
Mhamcontig_550223850 Rosmarinic Acid C4H low borderline
Mhamcontig_60230360 Rosmarinic Acid C4H low borderline
Mhamcontig_60230790 Rosmarinic Acid C4H low borderline
Mhamcontig_610236690 Rosmarinic Acid C4H low borderline
Mhamcontig_610238380 Rosmarinic Acid C4H medium pass
Mhamcontig_670243360 Rosmarinic Acid C4H medium pass
Mhamcontig_670243440 Rosmarinic Acid C4H medium pass
Mhamcontig_670243450 Rosmarinic Acid C4H medium pass
Mhamcontig_670243460 Rosmarinic Acid C4H low borderline
Mhamcontig_670243470 Rosmarinic Acid C4H low borderline