PlantSME Plant secondary metabolism enzyme database

Metzgeria hamata (metzgeria_hamata)

Imported from atlas release summary for Metzgeria hamata.

585
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Phenylpropanoid pathway 161 11 POD (96) View species results
Terpenoid pathway 144 21 BAHD (59) View species results
Alkaloid pathway 126 18 TRI/TRII (26) View species results
Flavonoid pathway 65 9 UFGT (28) View species results
Rosmarinic acid pathway 55 7 C4H (31) View species results
Steroid pathway 34 11 SMT1/SMT2/SMT3 (12) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 592 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 152 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Rosmarinic acid pathway
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Gene Pathway Family Confidence Status
Mhamcontig_670243600 Rosmarinic Acid C4H medium pass
Mhamcontig_680245410 Rosmarinic Acid C4H low borderline
Mhamcontig_680247670 Rosmarinic Acid C4H low borderline
Mhamcontig_740263820 Rosmarinic Acid C4H medium pass
Mhamcontig_750265420 Rosmarinic Acid C4H medium pass
Mhamcontig_750265650 Rosmarinic Acid C4H low borderline
Mhamcontig_750266360 Rosmarinic Acid C4H low borderline
Mhamcontig_870277630 Rosmarinic Acid C4H medium pass
Mhamcontig_90278780 Rosmarinic Acid C4H medium pass
Mhamcontig_1310045260 Rosmarinic Acid CPR medium pass
Mhamcontig_1420065250 Rosmarinic Acid CPR low borderline
Mhamcontig_1450069420 Rosmarinic Acid CPR medium pass
Mhamcontig_1310050930 Rosmarinic Acid HPPR medium pass
Mhamcontig_1310050960 Rosmarinic Acid HPPR medium pass
Mhamcontig_1310050980 Rosmarinic Acid HPPR medium pass
Mhamcontig_1780112820 Rosmarinic Acid HPPR low borderline
Mhamcontig_430217480 Rosmarinic Acid HPPR low borderline
Mhamcontig_60232610 Rosmarinic Acid HPPR low borderline
Mhamcontig_1440066900 Rosmarinic Acid PAL high pass
Mhamcontig_1540076760 Rosmarinic Acid PAL high pass
Mhamcontig_420215750 Rosmarinic Acid PAL high pass
Mhamcontig_420215800 Rosmarinic Acid PAL high pass
Mhamcontig_1040005160 Rosmarinic Acid RAS low borderline
Mhamcontig_1200024100 Rosmarinic Acid RAS medium pass
Mhamcontig_1310051350 Rosmarinic Acid RAS medium pass
Mhamcontig_1420065710 Rosmarinic Acid RAS low borderline
Mhamcontig_1440067200 Rosmarinic Acid RAS low borderline
Mhamcontig_1640094670 Rosmarinic Acid RAS medium pass
Mhamcontig_1660100800 Rosmarinic Acid RAS low borderline
Mhamcontig_1730107230 Rosmarinic Acid RAS low borderline
Mhamcontig_1740109540 Rosmarinic Acid RAS low borderline
Mhamcontig_1780112030 Rosmarinic Acid RAS low borderline
Mhamcontig_1780112060 Rosmarinic Acid RAS low borderline
Mhamcontig_1940135950 Rosmarinic Acid RAS low borderline
Mhamcontig_1940137230 Rosmarinic Acid RAS low borderline
Mhamcontig_1980140910 Rosmarinic Acid RAS low borderline
Mhamcontig_2400190890 Rosmarinic Acid RAS low borderline
Mhamcontig_2400190970 Rosmarinic Acid RAS low borderline
Mhamcontig_2400191000 Rosmarinic Acid RAS low borderline
Mhamcontig_2400191040 Rosmarinic Acid RAS low borderline
Mhamcontig_2400191060 Rosmarinic Acid RAS low borderline
Mhamcontig_2400191070 Rosmarinic Acid RAS low borderline
Mhamcontig_490219670 Rosmarinic Acid RAS medium pass
Mhamcontig_680244190 Rosmarinic Acid RAS low borderline
Mhamcontig_70259390 Rosmarinic Acid RAS low borderline
Mhamcontig_710261030 Rosmarinic Acid RAS low borderline
Mhamcontig_710261040 Rosmarinic Acid RAS low borderline
Mhamcontig_730262050 Rosmarinic Acid RAS low borderline
Mhamcontig_1560080110 Rosmarinic Acid TAT low borderline
Mhamcontig_690259150 Rosmarinic Acid TAT medium pass