PlantSME Plant secondary metabolism enzyme database

Metzgeria hamata (metzgeria_hamata)

Imported from atlas release summary for Metzgeria hamata.

585
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Phenylpropanoid pathway 161 11 POD (96) View species results
Terpenoid pathway 144 21 BAHD (59) View species results
Alkaloid pathway 126 18 TRI/TRII (26) View species results
Flavonoid pathway 65 9 UFGT (28) View species results
Rosmarinic acid pathway 55 7 C4H (31) View species results
Steroid pathway 34 11 SMT1/SMT2/SMT3 (12) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 592 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 152 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Phenylpropanoid pathway
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Gene Pathway Family Confidence Status
Mhamcontig_90278780 Phenylpropanoid C3'H/CYP98A medium borderline
Mhamcontig_1160017580 Phenylpropanoid C4H/CYP73A low borderline
Mhamcontig_1160017750 Phenylpropanoid C4H/CYP73A low borderline
Mhamcontig_1220028570 Phenylpropanoid C4H/CYP73A low borderline
Mhamcontig_1460071150 Phenylpropanoid C4H/CYP73A low borderline
Mhamcontig_1780113730 Phenylpropanoid C4H/CYP73A low borderline
Mhamcontig_1850124630 Phenylpropanoid C4H/CYP73A medium borderline
Mhamcontig_1910133100 Phenylpropanoid C4H/CYP73A low borderline
Mhamcontig_1910133560 Phenylpropanoid C4H/CYP73A medium borderline
Mhamcontig_1910133610 Phenylpropanoid C4H/CYP73A medium borderline
Mhamcontig_1910133620 Phenylpropanoid C4H/CYP73A medium borderline
Mhamcontig_1910133650 Phenylpropanoid C4H/CYP73A medium borderline
Mhamcontig_1910133660 Phenylpropanoid C4H/CYP73A medium borderline
Mhamcontig_1910133670 Phenylpropanoid C4H/CYP73A medium borderline
Mhamcontig_60230360 Phenylpropanoid C4H/CYP73A low borderline
Mhamcontig_680245410 Phenylpropanoid C4H/CYP73A low borderline
Mhamcontig_680247670 Phenylpropanoid C4H/CYP73A medium borderline
Mhamcontig_1280034930 Phenylpropanoid CAD medium pass
Mhamcontig_1310054600 Phenylpropanoid CAD medium borderline
Mhamcontig_1520075720 Phenylpropanoid CAD medium borderline
Mhamcontig_1550078800 Phenylpropanoid CAD low borderline
Mhamcontig_1640093860 Phenylpropanoid CAD medium pass
Mhamcontig_1640093870 Phenylpropanoid CAD medium pass
Mhamcontig_2160158060 Phenylpropanoid CAD low borderline
Mhamcontig_2170160660 Phenylpropanoid CAD low borderline
Mhamcontig_2220165710 Phenylpropanoid CAD medium borderline
Mhamcontig_230172060 Phenylpropanoid CAD low borderline
Mhamcontig_240188050 Phenylpropanoid CAD medium pass
Mhamcontig_260196420 Phenylpropanoid CAD low borderline
Mhamcontig_420214680 Phenylpropanoid CAD medium borderline
Mhamcontig_420215290 Phenylpropanoid CAD medium pass
Mhamcontig_420215310 Phenylpropanoid CAD medium borderline
Mhamcontig_660242260 Phenylpropanoid CAD low borderline
Mhamcontig_870277130 Phenylpropanoid CAD medium borderline
Mhamcontig_870277140 Phenylpropanoid CAD medium borderline
Mhamcontig_870277150 Phenylpropanoid CAD medium borderline
Mhamcontig_1940137450 Phenylpropanoid CCR medium borderline
Mhamcontig_280203900 Phenylpropanoid CCR medium pass
Mhamcontig_410214080 Phenylpropanoid CCR low borderline
Mhamcontig_680248270 Phenylpropanoid CCR medium borderline
Mhamcontig_1310047280 Phenylpropanoid CCoAOMT low borderline
Mhamcontig_1310047290 Phenylpropanoid CCoAOMT medium pass
Mhamcontig_290204300 Phenylpropanoid CCoAOMT medium pass
Mhamcontig_740263890 Phenylpropanoid CCoAOMT low borderline
Mhamcontig_1280035040 Phenylpropanoid COMT medium pass
Mhamcontig_1280035550 Phenylpropanoid COMT low borderline
Mhamcontig_1370059560 Phenylpropanoid COMT low borderline
Mhamcontig_1500072890 Phenylpropanoid COMT medium pass
Mhamcontig_1660103460 Phenylpropanoid COMT medium pass
Mhamcontig_1730108100 Phenylpropanoid COMT medium pass