PlantSME Plant secondary metabolism enzyme database

Metzgeria hamata (metzgeria_hamata)

Imported from atlas release summary for Metzgeria hamata.

585
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Phenylpropanoid pathway 161 11 POD (96) View species results
Terpenoid pathway 144 21 BAHD (59) View species results
Alkaloid pathway 126 18 TRI/TRII (26) View species results
Flavonoid pathway 65 9 UFGT (28) View species results
Rosmarinic acid pathway 55 7 C4H (31) View species results
Steroid pathway 34 11 SMT1/SMT2/SMT3 (12) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 592 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 152 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Phenylpropanoid pathway
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Gene Pathway Family Confidence Status
Mhamcontig_2040148070 Phenylpropanoid COMT low borderline
Mhamcontig_2060149960 Phenylpropanoid COMT low borderline
Mhamcontig_2170159540 Phenylpropanoid COMT medium pass
Mhamcontig_2170159560 Phenylpropanoid COMT medium pass
Mhamcontig_260199400 Phenylpropanoid COMT medium pass
Mhamcontig_390209810 Phenylpropanoid COMT low borderline
Mhamcontig_550224550 Phenylpropanoid COMT medium pass
Mhamcontig_60229460 Phenylpropanoid COMT low borderline
Mhamcontig_60231760 Phenylpropanoid COMT medium pass
Mhamcontig_690254540 Phenylpropanoid COMT low borderline
Mhamcontig_740263570 Phenylpropanoid COMT medium pass
Mhamcontig_1020002330 Phenylpropanoid CSE medium pass
Mhamcontig_1020002350 Phenylpropanoid CSE medium pass
Mhamcontig_1350056960 Phenylpropanoid CSE low borderline
Mhamcontig_1350057250 Phenylpropanoid CSE medium pass
Mhamcontig_1350057260 Phenylpropanoid CSE medium pass
Mhamcontig_1370059570 Phenylpropanoid CSE low borderline
Mhamcontig_1600088610 Phenylpropanoid CSE medium pass
Mhamcontig_1840122630 Phenylpropanoid CSE medium pass
Mhamcontig_1890128000 Phenylpropanoid CSE low borderline
Mhamcontig_1980139680 Phenylpropanoid CSE low borderline
Mhamcontig_1980141330 Phenylpropanoid CSE medium pass
Mhamcontig_2300172870 Phenylpropanoid CSE medium pass
Mhamcontig_260199740 Phenylpropanoid CSE medium pass
Mhamcontig_420216480 Phenylpropanoid CSE medium pass
Mhamcontig_680249450 Phenylpropanoid CSE medium pass
Mhamcontig_130041240 Phenylpropanoid F5H/CYP84A medium borderline
Mhamcontig_2110152170 Phenylpropanoid F5H/CYP84A medium borderline
Mhamcontig_670243460 Phenylpropanoid F5H/CYP84A medium borderline
Mhamcontig_670243470 Phenylpropanoid F5H/CYP84A medium borderline
Mhamcontig_1040005160 Phenylpropanoid HCT low borderline
Mhamcontig_1200024100 Phenylpropanoid HCT medium pass
Mhamcontig_1310051350 Phenylpropanoid HCT medium pass
Mhamcontig_1310051610 Phenylpropanoid HCT medium pass
Mhamcontig_1420065710 Phenylpropanoid HCT low borderline
Mhamcontig_1440067200 Phenylpropanoid HCT medium pass
Mhamcontig_1500073550 Phenylpropanoid HCT medium pass
Mhamcontig_1640094670 Phenylpropanoid HCT medium pass
Mhamcontig_1740109540 Phenylpropanoid HCT low borderline
Mhamcontig_1940135950 Phenylpropanoid HCT medium pass
Mhamcontig_1940135960 Phenylpropanoid HCT medium pass
Mhamcontig_1940137230 Phenylpropanoid HCT low borderline
Mhamcontig_1980140910 Phenylpropanoid HCT low borderline
Mhamcontig_2070151140 Phenylpropanoid HCT medium pass
Mhamcontig_2340179060 Phenylpropanoid HCT medium pass
Mhamcontig_490219670 Phenylpropanoid HCT medium pass
Mhamcontig_710261030 Phenylpropanoid HCT low borderline
Mhamcontig_710261040 Phenylpropanoid HCT low borderline
Mhamcontig_730262050 Phenylpropanoid HCT medium pass
Mhamcontig_1660099440 Phenylpropanoid LAC low borderline