PlantSME Plant secondary metabolism enzyme database

Ocimum sanctum (ocimum_sanctum)

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Imported from atlas release summary for Ocimum sanctum.

1854
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Common name
/
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 626 20 BAHD (219) View species results
Alkaloid pathway 406 27 GES (68) View species results
Phenylpropanoid pathway 380 13 POD (132) View species results
Flavonoid pathway 193 13 UFGT (88) View species results
Rosmarinic acid pathway 160 7 4CL (45) View species results
Steroid pathway 89 10 CAS (44) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1880 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 374 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: 8HGO
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Gene Pathway Family Confidence Status
ocimum_sanctum_Ote100009510021 Alkaloid 8HGO medium borderline
ocimum_sanctum_Ote100020040041 Alkaloid 8HGO medium borderline
ocimum_sanctum_Ote100035130041 Alkaloid 8HGO medium borderline
ocimum_sanctum_Ote100069020031 Alkaloid 8HGO medium borderline
ocimum_sanctum_Ote100069020032 Alkaloid 8HGO medium pass
ocimum_sanctum_Ote100090990011 Alkaloid 8HGO medium pass
ocimum_sanctum_Ote100128110101 Alkaloid 8HGO medium borderline
ocimum_sanctum_Ote100128110102 Alkaloid 8HGO medium borderline
ocimum_sanctum_Ote100150400031 Alkaloid 8HGO medium borderline
ocimum_sanctum_Ote100214630121 Alkaloid 8HGO medium borderline
ocimum_sanctum_Ote100231630161 Alkaloid 8HGO medium pass
ocimum_sanctum_Ote100231630241 Alkaloid 8HGO medium borderline
ocimum_sanctum_Ote100231630242 Alkaloid 8HGO medium borderline
ocimum_sanctum_Ote100240170011 Alkaloid 8HGO medium pass
ocimum_sanctum_Ote100240170041 Alkaloid 8HGO medium borderline
ocimum_sanctum_Ote100248730061 Alkaloid 8HGO medium borderline
ocimum_sanctum_Ote100248730111 Alkaloid 8HGO medium borderline
ocimum_sanctum_Ote100248730112 Alkaloid 8HGO medium borderline
ocimum_sanctum_Ote100261090101 Alkaloid 8HGO low borderline
ocimum_sanctum_Ote100264100211 Alkaloid 8HGO medium borderline
ocimum_sanctum_Ote100264100212 Alkaloid 8HGO medium borderline
ocimum_sanctum_Ote234538220011 Alkaloid 8HGO medium pass
ocimum_sanctum_Ote237949410021 Alkaloid 8HGO medium pass