Ocimum sanctum (ocimum_sanctum)
/
Imported from atlas release summary for Ocimum sanctum.
1854
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Common name
/
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
6
Pathways
Family Distribution
1854
Candidate Genes
C4H
6.98%
BAHD
6.15%
C3'H/CYP98A
5.31%
CYP76
4.28%
4CL
4.05%
UGT
3.79%
IFS
3.23%
POD
3.21%
Other Families
63.0%
More Families (96)
7DLGT
139
2.98%
DWF4/CYP90B1
123
2.63%
UFGT
120
2.57%
F3'H/CYP75B
118
2.53%
F3H
105
2.25%
T3O
98
2.1%
TPS
94
2.01%
T16H
89
1.91%
CAD
88
1.88%
NMT
86
1.84%
G8O/G8H
79
1.69%
GES
78
1.67%
CODM/T6ODM
76
1.63%
CYP71
73
1.56%
STR
69
1.48%
LAC
66
1.41%
BR6OX2/CYP85A2
63
1.35%
CAS
61
1.31%
FNS
55
1.18%
F5H/CYP84A
54
1.16%
HCT
50
1.07%
SMT1/SMT2/SMT3
45
0.96%
H6H
42
0.9%
IO
42
0.9%
TRI/TRII
39
0.84%
GS
38
0.81%
IFR
37
0.79%
DFR
37
0.79%
RAS
37
0.79%
PYKS
36
0.77%
PMT
36
0.77%
F3'5'H/CYP75A
35
0.75%
CSE
35
0.75%
CYP90D1
35
0.75%
CPD/CYP90A1
30
0.64%
COMT
28
0.6%
SLS
27
0.58%
7DLH
27
0.58%
PAL
27
0.58%
CCR
27
0.58%
BBE
24
0.51%
NCS
23
0.49%
8HGO
23
0.49%
ANS/LDOX
23
0.49%
TAT
23
0.49%
ANR
19
0.41%
LAMT
18
0.39%
16OMT
18
0.39%
SGD
16
0.34%
COR
15
0.32%
FPPS
15
0.32%
CYP80B1
14
0.3%
ROT3/CYP90C1
14
0.3%
CHS
13
0.28%
CCoAOMT
13
0.28%
CPR
13
0.28%
BR6OX1/CYP85A1
13
0.28%
6OMT_4OMT_SOMT
12
0.26%
MPO
12
0.26%
HPPR
11
0.24%
GGPPS
11
0.24%
DXS
11
0.24%
CYP51G1
10
0.21%
ISY
9
0.19%
SQE
9
0.19%
AACT
9
0.19%
HMGR
9
0.19%
CYP719
8
0.17%
CNMT
8
0.17%
TYDC_DDC
8
0.17%
SQS/FDFT1
7
0.15%
SMO1/SMO2
7
0.15%
HDR/IspH
6
0.13%
CHI
5
0.11%
MVD
5
0.11%
MVK
4
0.09%
ADC
3
0.06%
TDC
3
0.06%
CYP80F1
3
0.06%
FLS
3
0.06%
HMGS
3
0.06%
IDI
3
0.06%
CMK/IspE
3
0.06%
XMT_MXMT_DXMT
2
0.04%
DET2
2
0.04%
FK
2
0.04%
CPI1
2
0.04%
DXR
2
0.04%
PMK
2
0.04%
DWF5
1
0.02%
DWF7
1
0.02%
DWF1
1
0.02%
HYD1
1
0.02%
MDS/IspF
1
0.02%
MCT/IspD
1
0.02%
HDS/IspG
1
0.02%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Candidate Genes | Families | Top family | Results |
|---|---|---|---|---|
| Terpenoid pathway | 626 | 20 | BAHD (219) | View species results |
| Alkaloid pathway | 406 | 27 | GES (68) | View species results |
| Phenylpropanoid pathway | 380 | 13 | POD (132) | View species results |
| Flavonoid pathway | 193 | 13 | UFGT (88) | View species results |
| Rosmarinic acid pathway | 160 | 7 | 4CL (45) | View species results |
| Steroid pathway | 89 | 10 | CAS (44) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Families | Candidate genes | Included families |
|---|---|---|---|
| P450/oxygenase | 24 | 1880 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 374 | BAHD, HCT, RAS |
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: BAHD
| Gene | Pathway | Family | Confidence | Status | Best Target |
|---|---|---|---|---|---|
| ocimum_sanctum_Ote100000920041 | Terpenoid | BAHD | medium | pass | BAHD__00073__sp_Q9FF86_DCR_ARATH |
| ocimum_sanctum_Ote100001870041 | Terpenoid | BAHD | medium | pass | BAHD__00047__sp_Q5KS41_WSD11_ARATH |
| ocimum_sanctum_Ote100001870051 | Terpenoid | BAHD | low | borderline | BAHD__00047__sp_Q5KS41_WSD11_ARATH |
| ocimum_sanctum_Ote100001870061 | Terpenoid | BAHD | low | borderline | BAHD__00087__sp_Q9M3B1_WSD6_ARATH |
| ocimum_sanctum_Ote100002260071 | Terpenoid | BAHD | medium | pass | BAHD__00081__sp_Q9LJB4_5MAT_ARATH |
| ocimum_sanctum_Ote100004730001 | Terpenoid | BAHD | medium | pass | BAHD__00060__sp_Q8VYP5_ZDH14_ARATH |
| ocimum_sanctum_Ote100005630071 | Terpenoid | BAHD | low | borderline | BAHD__00055__sp_Q8H780_SCP13_ARATH |
| ocimum_sanctum_Ote100005890051 | Terpenoid | BAHD | medium | pass | BAHD__00058__sp_Q8LG50_LPAT2_ARATH |
| ocimum_sanctum_Ote100007850001 | Terpenoid | BAHD | medium | pass | BAHD__00006__sp_A0A2R6Q326_AT16_ACTCC |
| ocimum_sanctum_Ote100007850031 | Terpenoid | BAHD | medium | pass | BAHD__00001__sp_A0A068BGA5_AT1_ACTDE |
| ocimum_sanctum_Ote100009640181 | Terpenoid | BAHD | medium | pass | BAHD__00043__sp_Q52T38_ZDH22_ARATH |
| ocimum_sanctum_Ote100009640182 | Terpenoid | BAHD | medium | pass | BAHD__00043__sp_Q52T38_ZDH22_ARATH |
| ocimum_sanctum_Ote100009770021 | Terpenoid | BAHD | medium | pass | BAHD__00062__sp_Q93V61_LCAT3_ARATH |
| ocimum_sanctum_Ote100010940011 | Terpenoid | BAHD | low | borderline | BAHD__00073__sp_Q9FF86_DCR_ARATH |
| ocimum_sanctum_Ote100015320081 | Terpenoid | BAHD | medium | pass | BAHD__00057__sp_Q8L7R3_LPCT1_ARATH |
| ocimum_sanctum_Ote100015510011 | Terpenoid | BAHD | medium | pass | BAHD__00057__sp_Q8L7R3_LPCT1_ARATH |
| ocimum_sanctum_Ote100016600041 | Terpenoid | BAHD | medium | pass | BAHD__00035__sp_Q0WQK2_ZDHC9_ARATH |
| ocimum_sanctum_Ote100018110071 | Terpenoid | BAHD | medium | pass | BAHD__00024__sp_O23393_BIA1_ARATH |
| ocimum_sanctum_Ote100019690011 | Terpenoid | BAHD | medium | pass | BAHD__00090__sp_Q9SHJ5_GPAT1_ARATH |
| ocimum_sanctum_Ote100019880081 | Terpenoid | BAHD | low | borderline | BAHD__00024__sp_O23393_BIA1_ARATH |
| ocimum_sanctum_Ote100021070021 | Terpenoid | BAHD | medium | pass | BAHD__00014__sp_B9RK42_GPC1_RICCO |
| ocimum_sanctum_Ote100021670071 | Terpenoid | BAHD | low | borderline | BAHD__00073__sp_Q9FF86_DCR_ARATH |
| ocimum_sanctum_Ote100022500001 | Terpenoid | BAHD | medium | pass | BAHD__00083__sp_Q9LMM0_GPAT4_ARATH |
| ocimum_sanctum_Ote100025950011 | Terpenoid | BAHD | low | borderline | BAHD__00073__sp_Q9FF86_DCR_ARATH |
| ocimum_sanctum_Ote100027060071 | Terpenoid | BAHD | medium | pass | BAHD__00082__sp_Q9LLY4_LPAT1_BRANA |
| ocimum_sanctum_Ote100027470021 | Terpenoid | BAHD | medium | pass | BAHD__00039__sp_Q3ZPN4_ACMAT_VITLA |
| ocimum_sanctum_Ote100027900031 | Terpenoid | BAHD | medium | pass | BAHD__00040__sp_Q41745_LPAT_MAIZE |
| ocimum_sanctum_Ote100028260021 | Terpenoid | BAHD | medium | pass | BAHD__00073__sp_Q9FF86_DCR_ARATH |
| ocimum_sanctum_Ote100029600031 | Terpenoid | BAHD | medium | pass | BAHD__00085__sp_Q9M1K5_ZDH13_ARATH |
| ocimum_sanctum_Ote100029600032 | Terpenoid | BAHD | medium | pass | BAHD__00049__sp_Q5PNZ1_ZDH21_ARATH |
| ocimum_sanctum_Ote100030420041 | Terpenoid | BAHD | medium | pass | BAHD__00009__sp_A0A4P1QUJ3_TTHAT_LUPAN |
| ocimum_sanctum_Ote100030530091 | Terpenoid | BAHD | medium | pass | BAHD__00021__sp_K7K424_DAT2D_SOYBN |
| ocimum_sanctum_Ote100034670051 | Terpenoid | BAHD | medium | pass | BAHD__00057__sp_Q8L7R3_LPCT1_ARATH |
| ocimum_sanctum_Ote100034670071 | Terpenoid | BAHD | medium | pass | BAHD__00057__sp_Q8L7R3_LPCT1_ARATH |
| ocimum_sanctum_Ote100035980021 | Terpenoid | BAHD | medium | pass | BAHD__00026__sp_O64811_SCP9_ARATH |
| ocimum_sanctum_Ote100036600031 | Terpenoid | BAHD | medium | pass | BAHD__00034__sp_P10349_GPAT2_CUCMO |
| ocimum_sanctum_Ote100036600032 | Terpenoid | BAHD | medium | pass | BAHD__00034__sp_P10349_GPAT2_CUCMO |
| ocimum_sanctum_Ote100036600033 | Terpenoid | BAHD | medium | pass | BAHD__00034__sp_P10349_GPAT2_CUCMO |
| ocimum_sanctum_Ote100038540101 | Terpenoid | BAHD | medium | pass | BAHD__00088__sp_Q9M7Z1_ODB2_ARATH |
| ocimum_sanctum_Ote100038860071 | Terpenoid | BAHD | medium | pass | BAHD__00035__sp_Q0WQK2_ZDHC9_ARATH |
| ocimum_sanctum_Ote100039400021 | Terpenoid | BAHD | medium | pass | BAHD__00077__sp_Q9FNA9_PDAT1_ARATH |
| ocimum_sanctum_Ote100039400041 | Terpenoid | BAHD | medium | pass | BAHD__00077__sp_Q9FNA9_PDAT1_ARATH |
| ocimum_sanctum_Ote100044180011 | Terpenoid | BAHD | low | borderline | BAHD__00073__sp_Q9FF86_DCR_ARATH |
| ocimum_sanctum_Ote100046070101 | Terpenoid | BAHD | low | borderline | BAHD__00055__sp_Q8H780_SCP13_ARATH |
| ocimum_sanctum_Ote100051170091 | Terpenoid | BAHD | medium | pass | BAHD__00071__sp_Q9CAY3_GPAT5_ARATH |
| ocimum_sanctum_Ote100051560011 | Terpenoid | BAHD | medium | pass | BAHD__00055__sp_Q8H780_SCP13_ARATH |
| ocimum_sanctum_Ote100052570031 | Terpenoid | BAHD | medium | pass | BAHD__00025__sp_O64810_SCP10_ARATH |
| ocimum_sanctum_Ote100052840021 | Terpenoid | BAHD | medium | pass | BAHD__00017__sp_F4IDU4_MBOA1_ARATH |
| ocimum_sanctum_Ote100059310041 | Terpenoid | BAHD | low | borderline | BAHD__00081__sp_Q9LJB4_5MAT_ARATH |
| ocimum_sanctum_Ote100064090021 | Terpenoid | BAHD | low | borderline | BAHD__00038__sp_Q3EC11_ZDHC2_ARATH |