PlantSME Plant secondary metabolism enzyme database

Ocimum sanctum (ocimum_sanctum)

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Imported from atlas release summary for Ocimum sanctum.

1854
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Common name
/
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 626 20 BAHD (219) View species results
Alkaloid pathway 406 27 GES (68) View species results
Phenylpropanoid pathway 380 13 POD (132) View species results
Flavonoid pathway 193 13 UFGT (88) View species results
Rosmarinic acid pathway 160 7 4CL (45) View species results
Steroid pathway 89 10 CAS (44) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1880 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 374 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: NCS
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Gene Pathway Family Confidence Status Best Target
ocimum_sanctum_Ote100003861061 Alkaloid NCS medium borderline NCS__00001__sp_A2A1A0_NCS1_COPJA
ocimum_sanctum_Ote100006500051 Alkaloid NCS medium pass NCS__00005__sp_Q67A25_NCS_THLFG
ocimum_sanctum_Ote100025610041 Alkaloid NCS medium borderline NCS__00001__sp_A2A1A0_NCS1_COPJA
ocimum_sanctum_Ote100034770051 Alkaloid NCS medium borderline NCS__00001__sp_A2A1A0_NCS1_COPJA
ocimum_sanctum_Ote100037710081 Alkaloid NCS medium borderline NCS__00001__sp_A2A1A0_NCS1_COPJA
ocimum_sanctum_Ote100049460081 Alkaloid NCS medium borderline NCS__00001__sp_A2A1A0_NCS1_COPJA
ocimum_sanctum_Ote100049460101 Alkaloid NCS medium borderline NCS__00001__sp_A2A1A0_NCS1_COPJA
ocimum_sanctum_Ote100079470011 Alkaloid NCS medium borderline NCS__00001__sp_A2A1A0_NCS1_COPJA
ocimum_sanctum_Ote100079470021 Alkaloid NCS medium borderline NCS__00001__sp_A2A1A0_NCS1_COPJA
ocimum_sanctum_Ote100102830091 Alkaloid NCS low borderline NCS__00003__sp_Q4QTJ1_NCS2_PAPSO
ocimum_sanctum_Ote100111870031 Alkaloid NCS medium borderline NCS__00001__sp_A2A1A0_NCS1_COPJA
ocimum_sanctum_Ote100133840041 Alkaloid NCS low borderline NCS__00003__sp_Q4QTJ1_NCS2_PAPSO
ocimum_sanctum_Ote100142890091 Alkaloid NCS medium borderline NCS__00001__sp_A2A1A0_NCS1_COPJA
ocimum_sanctum_Ote100148620061 Alkaloid NCS medium borderline NCS__00001__sp_A2A1A0_NCS1_COPJA
ocimum_sanctum_Ote100162110011 Alkaloid NCS medium borderline NCS__00001__sp_A2A1A0_NCS1_COPJA
ocimum_sanctum_Ote100181920091 Alkaloid NCS medium borderline NCS__00001__sp_A2A1A0_NCS1_COPJA
ocimum_sanctum_Ote100182190081 Alkaloid NCS medium borderline NCS__00001__sp_A2A1A0_NCS1_COPJA
ocimum_sanctum_Ote100190430011 Alkaloid NCS medium borderline NCS__00001__sp_A2A1A0_NCS1_COPJA
ocimum_sanctum_Ote100212760021 Alkaloid NCS medium borderline NCS__00001__sp_A2A1A0_NCS1_COPJA
ocimum_sanctum_Ote100240720091 Alkaloid NCS medium borderline NCS__00001__sp_A2A1A0_NCS1_COPJA
ocimum_sanctum_Ote100253590061 Alkaloid NCS medium borderline NCS__00001__sp_A2A1A0_NCS1_COPJA
ocimum_sanctum_Ote100258490041 Alkaloid NCS medium borderline NCS__00001__sp_A2A1A0_NCS1_COPJA
ocimum_sanctum_Ote100272310011 Alkaloid NCS medium borderline NCS__00001__sp_A2A1A0_NCS1_COPJA