PlantSME Plant secondary metabolism enzyme database

Origanum vulgare (origanum_vulgare)

Imported from atlas release summary for Origanum vulgare.

2086
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 667 19 BAHD (241) View species results
Phenylpropanoid pathway 401 12 POD (131) View species results
Alkaloid pathway 380 24 7DLGT (81) View species results
Rosmarinic acid pathway 280 7 C4H (132) View species results
Flavonoid pathway 243 12 UFGT (164) View species results
Steroid pathway 115 14 CAS (48) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2563 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 489 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: UGT
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Gene Pathway Family Confidence Status Best Target
origanum_vulgare_1005.g2.t1 Terpenoid UGT medium pass UGT__00117__sp_U5NH37_7DLGT_CATRO
origanum_vulgare_1005.g5.t1 Terpenoid UGT medium pass UGT__00117__sp_U5NH37_7DLGT_CATRO
origanum_vulgare_1005.g7.t1 Terpenoid UGT medium pass UGT__00117__sp_U5NH37_7DLGT_CATRO
origanum_vulgare_1005.g9.t1 Terpenoid UGT medium pass UGT__00115__sp_U3U992_UGT8_CATRO
origanum_vulgare_100997.g1.t1 Terpenoid UGT low borderline UGT__00033__sp_F8WKW8_UGT9_GARJA
origanum_vulgare_1035.g2.t1 Terpenoid UGT medium pass UGT__00038__sp_K4CWS6_U75C1_SOLLC
origanum_vulgare_1035.g3.t1 Terpenoid UGT medium pass UGT__00031__sp_F8WKW0_UGT1_GARJA
origanum_vulgare_104118.g6.t1 Terpenoid UGT medium pass UGT__00033__sp_F8WKW8_UGT9_GARJA
origanum_vulgare_104118.g9.t1 Terpenoid UGT medium pass UGT__00033__sp_F8WKW8_UGT9_GARJA
origanum_vulgare_1082.g1.t1 Terpenoid UGT medium pass UGT__00108__sp_Q9SYK9_U74E2_ARATH
origanum_vulgare_1082.g2.t1 Terpenoid UGT medium pass UGT__00071__sp_Q6VAA6_U74G1_STERE
origanum_vulgare_1082.g4.t1 Terpenoid UGT medium pass UGT__00067__sp_P0DO74_GT742_SIRGR
origanum_vulgare_1105.g2.t1 Terpenoid UGT medium pass UGT__00063__sp_P0DO67_GT943_SIRGR
origanum_vulgare_1105.g3.t1 Terpenoid UGT medium pass UGT__00033__sp_F8WKW8_UGT9_GARJA
origanum_vulgare_1107.g14.t1 Terpenoid UGT medium pass UGT__00001__sp_A0A067YB04_UGT1_PUEML
origanum_vulgare_1107.g4.t1 Terpenoid UGT medium pass UGT__00088__sp_Q9LK73_U88A1_ARATH
origanum_vulgare_1107.g5.t1 Terpenoid UGT medium pass UGT__00047__sp_K7NBW3_74AC1_SIRGR
origanum_vulgare_1107.g6.t1 Terpenoid UGT medium pass UGT__00082__sp_Q9C9B0_U89B1_ARATH
origanum_vulgare_1113.g10.t1 Terpenoid UGT medium pass UGT__00038__sp_K4CWS6_U75C1_SOLLC
origanum_vulgare_1113.g9.t1 Terpenoid UGT medium pass UGT__00031__sp_F8WKW0_UGT1_GARJA
origanum_vulgare_113134.g1.t1 Terpenoid UGT medium pass UGT__00117__sp_U5NH37_7DLGT_CATRO
origanum_vulgare_113362.g1.t1 Terpenoid UGT medium pass UGT__00109__sp_Q9ZQ94_U73C5_ARATH
origanum_vulgare_114365.g2.t1 Terpenoid UGT medium pass UGT__00033__sp_F8WKW8_UGT9_GARJA
origanum_vulgare_116731.g1.t1 Terpenoid UGT medium pass UGT__00007__sp_A0A0A7HB61_U71A2_PANGI
origanum_vulgare_116731.g2.t1 Terpenoid UGT low borderline UGT__00028__sp_D3UAG1_U7A16_PYRCO
origanum_vulgare_119201.g1.t1 Terpenoid UGT medium pass UGT__00063__sp_P0DO67_GT943_SIRGR
origanum_vulgare_119841.g2.t1 Terpenoid UGT medium pass UGT__00033__sp_F8WKW8_UGT9_GARJA
origanum_vulgare_119841.g4.t1 Terpenoid UGT medium pass UGT__00033__sp_F8WKW8_UGT9_GARJA
origanum_vulgare_120029.g4.t1 Terpenoid UGT medium pass UGT__00047__sp_K7NBW3_74AC1_SIRGR
origanum_vulgare_120208.g2.t1 Terpenoid UGT medium pass UGT__00063__sp_P0DO67_GT943_SIRGR
origanum_vulgare_120208.g3.t1 Terpenoid UGT low borderline UGT__00037__sp_I1LCI8_FG2KO_SOYBN
origanum_vulgare_120391.g1.t1 Terpenoid UGT medium pass UGT__00033__sp_F8WKW8_UGT9_GARJA
origanum_vulgare_120391.g4.t1 Terpenoid UGT medium pass UGT__00033__sp_F8WKW8_UGT9_GARJA
origanum_vulgare_120574.g1.t1 Terpenoid UGT medium pass UGT__00041__sp_K4GGT4_73C11_BARVU
origanum_vulgare_120574.g2.t1 Terpenoid UGT medium pass UGT__00045__sp_K4GKX2_73C10_BARVU
origanum_vulgare_120574.g3.t1 Terpenoid UGT medium pass UGT__00109__sp_Q9ZQ94_U73C5_ARATH
origanum_vulgare_120574.g4.t1 Terpenoid UGT medium pass UGT__00063__sp_P0DO67_GT943_SIRGR
origanum_vulgare_121636.g1.t1 Terpenoid UGT medium pass UGT__00057__sp_O81498_U72E3_ARATH
origanum_vulgare_121928.g10.t1 Terpenoid UGT medium pass UGT__00026__sp_D3THI6_U7A15_MALDO
origanum_vulgare_121928.g12.t1 Terpenoid UGT medium pass UGT__00026__sp_D3THI6_U7A15_MALDO
origanum_vulgare_121928.g13.t1 Terpenoid UGT medium pass UGT__00028__sp_D3UAG1_U7A16_PYRCO
origanum_vulgare_121928.g14.t1 Terpenoid UGT medium pass UGT__00026__sp_D3THI6_U7A15_MALDO
origanum_vulgare_121928.g16.t1 Terpenoid UGT medium pass UGT__00026__sp_D3THI6_U7A15_MALDO
origanum_vulgare_121928.g17.t1 Terpenoid UGT medium pass UGT__00028__sp_D3UAG1_U7A16_PYRCO
origanum_vulgare_122479.g2.t1 Terpenoid UGT medium pass UGT__00009__sp_A0A0G4DBR5_FG3N_SOYBN
origanum_vulgare_122809.g13.t1 Terpenoid UGT medium pass UGT__00033__sp_F8WKW8_UGT9_GARJA
origanum_vulgare_122809.g14.t1 Terpenoid UGT medium pass UGT__00063__sp_P0DO67_GT943_SIRGR
origanum_vulgare_122809.g15.t1 Terpenoid UGT medium pass UGT__00033__sp_F8WKW8_UGT9_GARJA
origanum_vulgare_122809.g16.t1 Terpenoid UGT medium pass UGT__00033__sp_F8WKW8_UGT9_GARJA
origanum_vulgare_122809.g8.t1 Terpenoid UGT medium pass UGT__00064__sp_P0DO71_GT941_SIRGR