PlantSME Plant secondary metabolism enzyme database

Origanum vulgare (origanum_vulgare)

Imported from atlas release summary for Origanum vulgare.

2086
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 667 19 BAHD (241) View species results
Phenylpropanoid pathway 401 12 POD (131) View species results
Alkaloid pathway 380 24 7DLGT (81) View species results
Rosmarinic acid pathway 280 7 C4H (132) View species results
Flavonoid pathway 243 12 UFGT (164) View species results
Steroid pathway 115 14 CAS (48) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2563 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 489 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: UGT
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Gene Pathway Family Confidence Status Best Target
origanum_vulgare_300.g15.t1 Terpenoid UGT medium pass UGT__00067__sp_P0DO74_GT742_SIRGR
origanum_vulgare_304.g79.t1 Terpenoid UGT medium pass UGT__00063__sp_P0DO67_GT943_SIRGR
origanum_vulgare_304.g87.t1 Terpenoid UGT medium pass UGT__00064__sp_P0DO71_GT941_SIRGR
origanum_vulgare_304.g88.t1 Terpenoid UGT medium pass UGT__00063__sp_P0DO67_GT943_SIRGR
origanum_vulgare_304.g91.t1 Terpenoid UGT medium pass UGT__00064__sp_P0DO71_GT941_SIRGR
origanum_vulgare_304.g92.t1 Terpenoid UGT medium pass UGT__00064__sp_P0DO71_GT941_SIRGR
origanum_vulgare_362.g172.t1 Terpenoid UGT medium pass UGT__00071__sp_Q6VAA6_U74G1_STERE
origanum_vulgare_397.g143.t1 Terpenoid UGT medium pass UGT__00019__sp_A0A2R4LMF9_73C25_BARVU
origanum_vulgare_411.g18.t1 Terpenoid UGT medium pass UGT__00004__sp_A0A096SRM5_708A6_MAIZE
origanum_vulgare_423.g5.t1 Terpenoid UGT medium pass UGT__00105__sp_Q9SK82_U85A1_ARATH
origanum_vulgare_423.g8.t1 Terpenoid UGT medium pass UGT__00034__sp_F8WLS6_UGT6_CATRO
origanum_vulgare_423.g9.t1 Terpenoid UGT medium pass UGT__00032__sp_F8WKW1_UGT2_GARJA
origanum_vulgare_424.g82.t1 Terpenoid UGT medium pass UGT__00072__sp_Q6VAB0_U85C2_STERE
origanum_vulgare_424.g83.t1 Terpenoid UGT low borderline UGT__00047__sp_K7NBW3_74AC1_SIRGR
origanum_vulgare_424.g84.t1 Terpenoid UGT medium pass UGT__00032__sp_F8WKW1_UGT2_GARJA
origanum_vulgare_458.g93.t1 Terpenoid UGT medium pass UGT__00001__sp_A0A067YB04_UGT1_PUEML
origanum_vulgare_458.g94.t1 Terpenoid UGT medium pass UGT__00001__sp_A0A067YB04_UGT1_PUEML
origanum_vulgare_463.g47.t1 Terpenoid UGT medium pass UGT__00063__sp_P0DO67_GT943_SIRGR
origanum_vulgare_466.g1.t1 Terpenoid UGT medium pass UGT__00064__sp_P0DO71_GT941_SIRGR
origanum_vulgare_466.g2.t1 Terpenoid UGT medium pass UGT__00033__sp_F8WKW8_UGT9_GARJA
origanum_vulgare_476.g202.t1 Terpenoid UGT medium pass UGT__00024__sp_B3VI56_U91D2_STERE
origanum_vulgare_476.g204.t1 Terpenoid UGT medium pass UGT__00024__sp_B3VI56_U91D2_STERE
origanum_vulgare_476.g269.t1 Terpenoid UGT medium pass UGT__00103__sp_Q9M156_U72B1_ARATH
origanum_vulgare_476.g270.t1 Terpenoid UGT medium pass UGT__00103__sp_Q9M156_U72B1_ARATH
origanum_vulgare_480.g36.t1 Terpenoid UGT low borderline UGT__00078__sp_Q8W491_U73B3_ARATH
origanum_vulgare_480.g37.t1 Terpenoid UGT low borderline UGT__00078__sp_Q8W491_U73B3_ARATH
origanum_vulgare_480.g39.t1 Terpenoid UGT low borderline UGT__00075__sp_Q7Y232_U73B4_ARATH
origanum_vulgare_507.g151.t1 Terpenoid UGT medium pass UGT__00033__sp_F8WKW8_UGT9_GARJA
origanum_vulgare_507.g248.t1 Terpenoid UGT low borderline UGT__00032__sp_F8WKW1_UGT2_GARJA
origanum_vulgare_507.g249.t1 Terpenoid UGT medium pass UGT__00032__sp_F8WKW1_UGT2_GARJA
origanum_vulgare_507.g255.t1 Terpenoid UGT medium pass UGT__00024__sp_B3VI56_U91D2_STERE
origanum_vulgare_507.g256.t1 Terpenoid UGT medium pass UGT__00024__sp_B3VI56_U91D2_STERE
origanum_vulgare_507.g279.t1 Terpenoid UGT medium pass UGT__00032__sp_F8WKW1_UGT2_GARJA
origanum_vulgare_507.g281.t1 Terpenoid UGT low borderline UGT__00032__sp_F8WKW1_UGT2_GARJA
origanum_vulgare_507.g282.t1 Terpenoid UGT medium pass UGT__00032__sp_F8WKW1_UGT2_GARJA
origanum_vulgare_507.g283.t1 Terpenoid UGT medium pass UGT__00105__sp_Q9SK82_U85A1_ARATH
origanum_vulgare_507.g351.t1 Terpenoid UGT medium pass UGT__00078__sp_Q8W491_U73B3_ARATH
origanum_vulgare_507.g352.t1 Terpenoid UGT medium pass UGT__00078__sp_Q8W491_U73B3_ARATH
origanum_vulgare_541.g8.t1 Terpenoid UGT medium pass UGT__00032__sp_F8WKW1_UGT2_GARJA
origanum_vulgare_584.g1.t1 Terpenoid UGT medium pass UGT__00115__sp_U3U992_UGT8_CATRO
origanum_vulgare_645.g124.t1 Terpenoid UGT medium pass UGT__00032__sp_F8WKW1_UGT2_GARJA
origanum_vulgare_645.g72.t1 Terpenoid UGT medium pass UGT__00024__sp_B3VI56_U91D2_STERE
origanum_vulgare_650.g2.t1 Terpenoid UGT medium pass UGT__00117__sp_U5NH37_7DLGT_CATRO
origanum_vulgare_650.g3.t1 Terpenoid UGT medium pass UGT__00081__sp_Q9C768_U76B1_ARATH
origanum_vulgare_650.g4.t1 Terpenoid UGT medium pass UGT__00081__sp_Q9C768_U76B1_ARATH
origanum_vulgare_650.g6.t1 Terpenoid UGT medium pass UGT__00081__sp_Q9C768_U76B1_ARATH
origanum_vulgare_650.g7.t1 Terpenoid UGT medium pass UGT__00081__sp_Q9C768_U76B1_ARATH
origanum_vulgare_70957.g1.t1 Terpenoid UGT medium pass UGT__00078__sp_Q8W491_U73B3_ARATH
origanum_vulgare_753.g1.t1 Terpenoid UGT medium pass UGT__00034__sp_F8WLS6_UGT6_CATRO
origanum_vulgare_753.g3.t1 Terpenoid UGT medium pass UGT__00034__sp_F8WLS6_UGT6_CATRO