PlantSME Plant secondary metabolism enzyme database

Origanum vulgare (origanum_vulgare)

Imported from atlas release summary for Origanum vulgare.

2395
Candidate Protein Records
2086
Pathway-Level Records
5646
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 667 19 BAHD (241) View species results
Phenylpropanoid pathway 401 12 POD (131) View species results
Alkaloid pathway 380 24 7DLGT (81) View species results
Rosmarinic acid pathway 280 7 C4H (132) View species results
Flavonoid pathway 243 12 UFGT (164) View species results
Steroid pathway 115 14 CAS (48) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2563 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 489 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Terpenoid pathway
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Protein/Isoform Record Pathway Family Confidence Status Best Target
origanum_vulgare_541.g8.t1 Terpenoid UGT medium pass UGT__00032__sp_F8WKW1_UGT2_GARJA
origanum_vulgare_584.g1.t1 Terpenoid UGT medium pass UGT__00115__sp_U3U992_UGT8_CATRO
origanum_vulgare_645.g124.t1 Terpenoid UGT medium pass UGT__00032__sp_F8WKW1_UGT2_GARJA
origanum_vulgare_645.g72.t1 Terpenoid UGT medium pass UGT__00024__sp_B3VI56_U91D2_STERE
origanum_vulgare_650.g2.t1 Terpenoid UGT medium pass UGT__00117__sp_U5NH37_7DLGT_CATRO
origanum_vulgare_650.g3.t1 Terpenoid UGT medium pass UGT__00081__sp_Q9C768_U76B1_ARATH
origanum_vulgare_650.g4.t1 Terpenoid UGT medium pass UGT__00081__sp_Q9C768_U76B1_ARATH
origanum_vulgare_650.g6.t1 Terpenoid UGT medium pass UGT__00081__sp_Q9C768_U76B1_ARATH
origanum_vulgare_650.g7.t1 Terpenoid UGT medium pass UGT__00081__sp_Q9C768_U76B1_ARATH
origanum_vulgare_70957.g1.t1 Terpenoid UGT medium pass UGT__00078__sp_Q8W491_U73B3_ARATH
origanum_vulgare_753.g1.t1 Terpenoid UGT medium pass UGT__00034__sp_F8WLS6_UGT6_CATRO
origanum_vulgare_753.g3.t1 Terpenoid UGT medium pass UGT__00034__sp_F8WLS6_UGT6_CATRO
origanum_vulgare_759.g14.t1 Terpenoid UGT medium pass UGT__00035__sp_I1KEV6_FG3H_SOYBN
origanum_vulgare_771.g26.t1 Terpenoid UGT medium pass UGT__00081__sp_Q9C768_U76B1_ARATH
origanum_vulgare_771.g28.t1 Terpenoid UGT medium pass UGT__00115__sp_U3U992_UGT8_CATRO
origanum_vulgare_771.g29.t1 Terpenoid UGT medium pass UGT__00117__sp_U5NH37_7DLGT_CATRO
origanum_vulgare_771.g30.t1 Terpenoid UGT medium pass UGT__00117__sp_U5NH37_7DLGT_CATRO
origanum_vulgare_771.g31.t1 Terpenoid UGT medium pass UGT__00115__sp_U3U992_UGT8_CATRO
origanum_vulgare_771.g32.t1 Terpenoid UGT medium pass UGT__00115__sp_U3U992_UGT8_CATRO
origanum_vulgare_771.g34.t1 Terpenoid UGT medium pass UGT__00115__sp_U3U992_UGT8_CATRO
origanum_vulgare_771.g35.t1 Terpenoid UGT medium pass UGT__00117__sp_U5NH37_7DLGT_CATRO
origanum_vulgare_771.g38.t1 Terpenoid UGT medium pass UGT__00115__sp_U3U992_UGT8_CATRO
origanum_vulgare_771.g39.t1 Terpenoid UGT medium pass UGT__00117__sp_U5NH37_7DLGT_CATRO
origanum_vulgare_790.g1.t1 Terpenoid UGT low borderline UGT__00032__sp_F8WKW1_UGT2_GARJA
origanum_vulgare_816.g86.t1 Terpenoid UGT medium pass UGT__00079__sp_Q94A84_U72E1_ARATH
origanum_vulgare_816.g88.t1 Terpenoid UGT medium pass UGT__00079__sp_Q94A84_U72E1_ARATH
origanum_vulgare_826.g254.t1 Terpenoid UGT medium pass UGT__00032__sp_F8WKW1_UGT2_GARJA
origanum_vulgare_83889.g1.t1 Terpenoid UGT medium pass UGT__00108__sp_Q9SYK9_U74E2_ARATH
origanum_vulgare_83889.g2.t1 Terpenoid UGT medium pass UGT__00071__sp_Q6VAA6_U74G1_STERE
origanum_vulgare_842.g239.t1 Terpenoid UGT medium pass UGT__00055__sp_O48676_U74B1_ARATH
origanum_vulgare_84233.g1.t1 Terpenoid UGT medium pass UGT__00031__sp_F8WKW0_UGT1_GARJA
origanum_vulgare_84345.g1.t1 Terpenoid UGT medium pass UGT__00117__sp_U5NH37_7DLGT_CATRO
origanum_vulgare_844.g164.t1 Terpenoid UGT medium pass UGT__00078__sp_Q8W491_U73B3_ARATH
origanum_vulgare_844.g165.t1 Terpenoid UGT medium pass UGT__00112__sp_Q9ZQG4_U73B5_ARATH
origanum_vulgare_844.g166.t1 Terpenoid UGT medium pass UGT__00078__sp_Q8W491_U73B3_ARATH
origanum_vulgare_844.g167.t1 Terpenoid UGT medium pass UGT__00079__sp_Q94A84_U72E1_ARATH
origanum_vulgare_844.g168.t1 Terpenoid UGT medium pass UGT__00103__sp_Q9M156_U72B1_ARATH
origanum_vulgare_844.g169.t1 Terpenoid UGT medium pass UGT__00075__sp_Q7Y232_U73B4_ARATH
origanum_vulgare_844.g170.t1 Terpenoid UGT medium pass UGT__00112__sp_Q9ZQG4_U73B5_ARATH
origanum_vulgare_844.g90.t1 Terpenoid UGT medium pass UGT__00033__sp_F8WKW8_UGT9_GARJA
origanum_vulgare_854.g19.t1 Terpenoid UGT medium pass UGT__00109__sp_Q9ZQ94_U73C5_ARATH
origanum_vulgare_854.g21.t1 Terpenoid UGT medium pass UGT__00109__sp_Q9ZQ94_U73C5_ARATH
origanum_vulgare_85894.g1.t1 Terpenoid UGT medium pass UGT__00081__sp_Q9C768_U76B1_ARATH
origanum_vulgare_85917.g1.t1 Terpenoid UGT medium pass UGT__00075__sp_Q7Y232_U73B4_ARATH
origanum_vulgare_883.g1.t1 Terpenoid UGT medium pass UGT__00103__sp_Q9M156_U72B1_ARATH
origanum_vulgare_891.g35.t1 Terpenoid UGT medium pass UGT__00013__sp_A0A172J2D0_UGT2_PUEML
origanum_vulgare_936.g43.t1 Terpenoid UGT medium pass UGT__00042__sp_K4GHR9_UGT1_BARVU
origanum_vulgare_936.g44.t1 Terpenoid UGT medium pass UGT__00109__sp_Q9ZQ94_U73C5_ARATH
origanum_vulgare_948.g15.t1 Terpenoid UGT medium pass UGT__00116__sp_U3UA11_UGT7_CATRO
origanum_vulgare_948.g16.t1 Terpenoid UGT medium pass UGT__00116__sp_U3UA11_UGT7_CATRO