PlantSME Plant secondary metabolism enzyme database

Oryza sativa.spZS97 (oryza_sativa_spzs97)

Imported from atlas release summary for Oryza sativa.spZS97.

2627
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 769 19 BAHD (300) View species results
Alkaloid pathway 622 21 7DLGT (95) View species results
Phenylpropanoid pathway 490 11 POD (243) View species results
Flavonoid pathway 355 12 UFGT (201) View species results
Steroid pathway 206 13 SMT1/SMT2/SMT3 (85) View species results
Rosmarinic acid pathway 185 7 C4H (83) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2470 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 502 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: 4CL
Reset
Gene Pathway Family Confidence Status
OsatZS9701G0021800.1 Flavonoid 4CL medium pass
OsatZS9701G0021800.2 Flavonoid 4CL medium pass
OsatZS9701G0041810.1 Flavonoid 4CL low borderline
OsatZS9701G0043470.1 Flavonoid 4CL low borderline
OsatZS9701G0045570.1 Flavonoid 4CL low borderline
OsatZS9701G0045570.2 Flavonoid 4CL low borderline
OsatZS9701G0045570.3 Flavonoid 4CL low borderline
OsatZS9701G0045570.4 Flavonoid 4CL low borderline
OsatZS9701G0052770.1 Flavonoid 4CL low borderline
OsatZS9701G0052770.2 Flavonoid 4CL low borderline
OsatZS9701G0064730.1 Flavonoid 4CL medium pass
OsatZS9701G0064730.2 Flavonoid 4CL medium pass
OsatZS9701G0064730.3 Flavonoid 4CL medium pass
OsatZS9701G0064770.1 Flavonoid 4CL medium pass
OsatZS9701G0064770.2 Flavonoid 4CL medium pass
OsatZS9701G0064770.3 Flavonoid 4CL medium pass
OsatZS9702G0001690.1 Flavonoid 4CL medium pass
OsatZS9702G0007500.1 Flavonoid 4CL medium pass
OsatZS9702G0007500.2 Flavonoid 4CL medium pass
OsatZS9702G0007500.3 Flavonoid 4CL medium pass
OsatZS9702G0033880.1 Flavonoid 4CL low borderline
OsatZS9702G0049370.1 Flavonoid 4CL medium pass
OsatZS9702G0060760.1 Flavonoid 4CL low borderline
OsatZS9703G0002770.1 Flavonoid 4CL medium pass
OsatZS9703G0002940.1 Flavonoid 4CL medium pass
OsatZS9703G0003080.2 Flavonoid 4CL medium pass
OsatZS9703G0003080.3 Flavonoid 4CL medium pass
OsatZS9703G0004690.1 Flavonoid 4CL medium pass
OsatZS9703G0018390.1 Flavonoid 4CL low borderline
OsatZS9703G0060990.1 Flavonoid 4CL low borderline
OsatZS9703G0060990.2 Flavonoid 4CL low borderline
OsatZS9703G0060990.3 Flavonoid 4CL low borderline
OsatZS9703G0060990.4 Flavonoid 4CL low borderline
OsatZS9704G0022850.1 Flavonoid 4CL medium pass
OsatZS9704G0022850.2 Flavonoid 4CL medium pass
OsatZS9704G0031290.1 Flavonoid 4CL low borderline
OsatZS9704G0050550.1 Flavonoid 4CL low borderline
OsatZS9704G0054910.1 Flavonoid 4CL medium pass
OsatZS9704G0055800.1 Flavonoid 4CL medium pass
OsatZS9705G0002860.1 Flavonoid 4CL low borderline
OsatZS9705G0022580.1 Flavonoid 4CL low borderline
OsatZS9705G0022580.2 Flavonoid 4CL low borderline
OsatZS9705G0022580.3 Flavonoid 4CL low borderline
OsatZS9705G0022580.4 Flavonoid 4CL low borderline
OsatZS9706G0005110.1 Flavonoid 4CL low borderline
OsatZS9706G0005110.2 Flavonoid 4CL low borderline
OsatZS9706G0005110.4 Flavonoid 4CL low borderline
OsatZS9706G0005110.5 Flavonoid 4CL low borderline
OsatZS9706G0040400.1 Flavonoid 4CL medium pass
OsatZS9706G0040400.2 Flavonoid 4CL medium pass