PlantSME Plant secondary metabolism enzyme database

Oryza sativa.spZS97 (oryza_sativa_spzs97)

Imported from atlas release summary for Oryza sativa.spZS97.

2627
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 769 19 BAHD (300) View species results
Alkaloid pathway 622 21 7DLGT (95) View species results
Phenylpropanoid pathway 490 11 POD (243) View species results
Flavonoid pathway 355 12 UFGT (201) View species results
Steroid pathway 206 13 SMT1/SMT2/SMT3 (85) View species results
Rosmarinic acid pathway 185 7 C4H (83) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2470 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 502 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: PYKS
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Gene Pathway Family Confidence Status
OsatZS9701G0032350.1 Alkaloid PYKS low borderline
OsatZS9701G0038540.1 Alkaloid PYKS high pass
OsatZS9701G0038540.2 Alkaloid PYKS high pass
OsatZS9702G0059880.1 Alkaloid PYKS low borderline
OsatZS9703G0005450.1 Alkaloid PYKS low borderline
OsatZS9703G0006990.1 Alkaloid PYKS low borderline
OsatZS9703G0010580.1 Alkaloid PYKS low borderline
OsatZS9703G0012690.1 Alkaloid PYKS low borderline
OsatZS9703G0025280.1 Alkaloid PYKS low borderline
OsatZS9703G0025310.1 Alkaloid PYKS low borderline
OsatZS9703G0046000.1 Alkaloid PYKS high pass
OsatZS9704G0000470.1 Alkaloid PYKS high pass
OsatZS9704G0000470.2 Alkaloid PYKS high pass
OsatZS9704G0002030.1 Alkaloid PYKS low borderline
OsatZS9704G0022190.1 Alkaloid PYKS high pass
OsatZS9704G0052110.1 Alkaloid PYKS low borderline
OsatZS9704G0052110.2 Alkaloid PYKS low borderline
OsatZS9705G0010240.1 Alkaloid PYKS high pass
OsatZS9705G0010270.1 Alkaloid PYKS high pass
OsatZS9705G0045260.1 Alkaloid PYKS low borderline
OsatZS9705G0045960.1 Alkaloid PYKS low borderline
OsatZS9706G0014180.1 Alkaloid PYKS low borderline
OsatZS9706G0014270.1 Alkaloid PYKS low borderline
OsatZS9706G0014300.1 Alkaloid PYKS low borderline
OsatZS9706G0035230.1 Alkaloid PYKS low borderline
OsatZS9707G0010830.1 Alkaloid PYKS high pass
OsatZS9707G0017640.1 Alkaloid PYKS high pass
OsatZS9707G0022860.1 Alkaloid PYKS high pass
OsatZS9707G0032510.1 Alkaloid PYKS high pass
OsatZS9707G0032530.1 Alkaloid PYKS high pass
OsatZS9707G0034730.1 Alkaloid PYKS high pass
OsatZS9707G0034780.1 Alkaloid PYKS high pass
OsatZS9707G0034860.1 Alkaloid PYKS high pass
OsatZS9709G0018170.1 Alkaloid PYKS low borderline
OsatZS9710G0006990.1 Alkaloid PYKS low borderline
OsatZS9710G0007050.1 Alkaloid PYKS high pass
OsatZS9710G0008140.1 Alkaloid PYKS high pass
OsatZS9710G0008150.1 Alkaloid PYKS high pass
OsatZS9710G0009090.1 Alkaloid PYKS high pass
OsatZS9710G0009150.1 Alkaloid PYKS high pass
OsatZS9710G0009160.1 Alkaloid PYKS high pass
OsatZS9710G0010230.1 Alkaloid PYKS high pass
OsatZS9710G0010250.1 Alkaloid PYKS medium pass
OsatZS9710G0026510.1 Alkaloid PYKS low borderline
OsatZS9710G0031360.1 Alkaloid PYKS low borderline
OsatZS9710G0032500.1 Alkaloid PYKS medium pass
OsatZS9711G0031040.1 Alkaloid PYKS high pass
OsatZS9711G0031070.1 Alkaloid PYKS high pass
OsatZS9711G0031100.1 Alkaloid PYKS high pass
OsatZS9711G0031110.1 Alkaloid PYKS high pass