PlantSME Plant secondary metabolism enzyme database

Oryza sativa.spZS97 (oryza_sativa_spzs97)

Imported from atlas release summary for Oryza sativa.spZS97.

2627
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 769 19 BAHD (300) View species results
Alkaloid pathway 622 21 7DLGT (95) View species results
Phenylpropanoid pathway 490 11 POD (243) View species results
Flavonoid pathway 355 12 UFGT (201) View species results
Steroid pathway 206 13 SMT1/SMT2/SMT3 (85) View species results
Rosmarinic acid pathway 185 7 C4H (83) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2470 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 502 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: C4H
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Gene Pathway Family Confidence Status
OsatZS9701G0047220.1 Flavonoid C4H medium borderline
OsatZS9701G0057420.1 Flavonoid C4H medium pass
OsatZS9705G0022960.1 Flavonoid C4H medium borderline
OsatZS9706G0032110.1 Flavonoid C4H medium borderline
OsatZS9706G0032110.3 Flavonoid C4H medium borderline
OsatZS9707G0045680.1 Flavonoid C4H medium borderline
OsatZS9708G0025680.1 Flavonoid C4H low borderline
OsatZS9701G0007650.1 Rosmarinic Acid C4H low borderline
OsatZS9701G0008790.1 Rosmarinic Acid C4H low borderline
OsatZS9701G0009980.1 Rosmarinic Acid C4H low borderline
OsatZS9701G0009990.1 Rosmarinic Acid C4H low borderline
OsatZS9701G0010040.1 Rosmarinic Acid C4H low borderline
OsatZS9701G0010090.1 Rosmarinic Acid C4H low borderline
OsatZS9701G0011450.1 Rosmarinic Acid C4H medium pass
OsatZS9701G0011480.1 Rosmarinic Acid C4H low borderline
OsatZS9701G0011500.1 Rosmarinic Acid C4H low borderline
OsatZS9701G0023280.1 Rosmarinic Acid C4H low borderline
OsatZS9701G0025990.1 Rosmarinic Acid C4H low borderline
OsatZS9701G0027300.1 Rosmarinic Acid C4H low borderline
OsatZS9701G0033530.1 Rosmarinic Acid C4H medium pass
OsatZS9701G0035220.1 Rosmarinic Acid C4H low borderline
OsatZS9701G0038530.1 Rosmarinic Acid C4H low borderline
OsatZS9701G0038530.2 Rosmarinic Acid C4H low borderline
OsatZS9701G0040960.1 Rosmarinic Acid C4H low borderline
OsatZS9701G0040960.2 Rosmarinic Acid C4H low borderline
OsatZS9701G0040960.3 Rosmarinic Acid C4H low borderline
OsatZS9701G0040970.1 Rosmarinic Acid C4H low borderline
OsatZS9701G0040980.1 Rosmarinic Acid C4H low borderline
OsatZS9701G0040980.2 Rosmarinic Acid C4H low borderline
OsatZS9701G0040980.3 Rosmarinic Acid C4H low borderline
OsatZS9701G0040980.4 Rosmarinic Acid C4H low borderline
OsatZS9701G0040980.6 Rosmarinic Acid C4H low borderline
OsatZS9701G0040980.7 Rosmarinic Acid C4H low borderline
OsatZS9701G0040980.8 Rosmarinic Acid C4H low borderline
OsatZS9701G0041000.1 Rosmarinic Acid C4H low borderline
OsatZS9701G0041020.1 Rosmarinic Acid C4H low borderline
OsatZS9701G0047200.1 Rosmarinic Acid C4H low borderline
OsatZS9701G0047220.1 Rosmarinic Acid C4H low borderline
OsatZS9701G0057420.1 Rosmarinic Acid C4H medium pass
OsatZS9701G0069340.1 Rosmarinic Acid C4H low borderline
OsatZS9701G0069340.2 Rosmarinic Acid C4H low borderline
OsatZS9701G0069340.3 Rosmarinic Acid C4H low borderline
OsatZS9702G0000910.1 Rosmarinic Acid C4H low borderline
OsatZS9702G0007080.1 Rosmarinic Acid C4H low borderline
OsatZS9702G0008270.1 Rosmarinic Acid C4H low borderline
OsatZS9702G0008300.1 Rosmarinic Acid C4H low borderline
OsatZS9702G0008340.1 Rosmarinic Acid C4H medium pass
OsatZS9702G0008390.1 Rosmarinic Acid C4H low borderline
OsatZS9702G0008390.2 Rosmarinic Acid C4H low borderline
OsatZS9702G0008390.3 Rosmarinic Acid C4H low borderline